Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.02■□□□□ 0.32
BCKDHBP21953 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.02■□□□□ 0.32
BCKDHBP21953 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BCKDHBP21953 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.02■□□□□ 0.32
BCKDHBP21953 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.02■□□□□ 0.32
BCKDHBP21953 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.02■□□□□ 0.32
BCKDHBP21953 AP001059.3-201ENST00000619053 235 ntBASIC17.02■□□□□ 0.32
BCKDHBP21953 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BCKDHBP21953 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BCKDHBP21953 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
BCKDHBP21953 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.02■□□□□ 0.31
BCKDHBP21953 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.02■□□□□ 0.31
BCKDHBP21953 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BCKDHBP21953 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BCKDHBP21953 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
BCKDHBP21953 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
BCKDHBP21953 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
BCKDHBP21953 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.02■□□□□ 0.31
BCKDHBP21953 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.01■□□□□ 0.31
BCKDHBP21953 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.01■□□□□ 0.31
BCKDHBP21953 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.01■□□□□ 0.31
BCKDHBP21953 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.01■□□□□ 0.31
BCKDHBP21953 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 SPCS2P4-201ENST00000436160 681 ntBASIC17.01■□□□□ 0.31
BCKDHBP21953 RBPMS2P1-201ENST00000437762 623 ntBASIC17.01■□□□□ 0.31
BCKDHBP21953 AC002472.2-201ENST00000442739 958 ntBASIC17.01■□□□□ 0.31
BCKDHBP21953 KLF2P3-201ENST00000451977 1087 ntBASIC17.01■□□□□ 0.31
BCKDHBP21953 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.01■□□□□ 0.31
BCKDHBP21953 AL512356.2-201ENST00000546955 174 ntBASIC17.01■□□□□ 0.31
BCKDHBP21953 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.01■□□□□ 0.31
BCKDHBP21953 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.01■□□□□ 0.31
BCKDHBP21953 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.01■□□□□ 0.31
BCKDHBP21953 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 RARRES2P8-201ENST00000566335 367 ntBASIC17.01■□□□□ 0.31
BCKDHBP21953 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 RN7SL204P-201ENST00000582831 262 ntBASIC17.01■□□□□ 0.31
BCKDHBP21953 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.01■□□□□ 0.31
BCKDHBP21953 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BCKDHBP21953 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BCKDHBP21953 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17■□□□□ 0.31
BCKDHBP21953 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
BCKDHBP21953 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17■□□□□ 0.31
BCKDHBP21953 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17■□□□□ 0.31
BCKDHBP21953 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17■□□□□ 0.31
BCKDHBP21953 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17■□□□□ 0.31
BCKDHBP21953 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
BCKDHBP21953 TSPY16P-201ENST00000449843 468 ntBASIC17■□□□□ 0.31
BCKDHBP21953 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17■□□□□ 0.31
BCKDHBP21953 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17■□□□□ 0.31
BCKDHBP21953 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17■□□□□ 0.31
BCKDHBP21953 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17■□□□□ 0.31
BCKDHBP21953 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17■□□□□ 0.31
BCKDHBP21953 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17■□□□□ 0.31
BCKDHBP21953 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17■□□□□ 0.31
BCKDHBP21953 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17■□□□□ 0.31
BCKDHBP21953 AL139327.4-201ENST00000612362 153 ntBASIC17■□□□□ 0.31
BCKDHBP21953 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17■□□□□ 0.31
BCKDHBP21953 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BCKDHBP21953 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17■□□□□ 0.31
BCKDHBP21953 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17■□□□□ 0.31
BCKDHBP21953 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms