Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 KRT8P11-201ENST00000409686 1436 ntBASIC13.32□□□□□ -0.28
RAB4AP20338 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 AC092384.3-202ENST00000564646 2873 ntBASIC13.32□□□□□ -0.28
RAB4AP20338 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.32□□□□□ -0.28
RAB4AP20338 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB4AP20338 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB4AP20338 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB4AP20338 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 HLA-B-256ENST00000639848 1089 ntBASIC13.32□□□□□ -0.28
RAB4AP20338 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 RCC2P3-201ENST00000418112 1537 ntBASIC13.32□□□□□ -0.28
RAB4AP20338 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RAB4AP20338 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB4AP20338 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB4AP20338 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB4AP20338 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 AC092171.3-201ENST00000610122 2651 ntBASIC13.31□□□□□ -0.28
RAB4AP20338 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAB4AP20338 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
RAB4AP20338 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 MIPEPP3-201ENST00000412105 444 ntBASIC13.31□□□□□ -0.28
RAB4AP20338 AC004911.1-201ENST00000416316 871 ntBASIC13.31□□□□□ -0.28
RAB4AP20338 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB4AP20338 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB4AP20338 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.31□□□□□ -0.28
RAB4AP20338 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB4AP20338 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 AC091874.3-201ENST00000512672 1195 ntBASIC13.31□□□□□ -0.28
RAB4AP20338 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB4AP20338 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.31□□□□□ -0.28
RAB4AP20338 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB4AP20338 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB4AP20338 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
RAB4AP20338 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB4AP20338 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB4AP20338 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB4AP20338 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms