Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SP9P0CG40 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SP9P0CG40 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SP9P0CG40 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SP9P0CG40 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SP9P0CG40 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.87■□□□□ 0.29
SP9P0CG40 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.87■□□□□ 0.29
SP9P0CG40 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.87■□□□□ 0.29
SP9P0CG40 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
SP9P0CG40 KRT17P8-201ENST00000540749 863 ntBASIC16.87■□□□□ 0.29
SP9P0CG40 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.87■□□□□ 0.29
SP9P0CG40 RAB43P1-201ENST00000561790 589 ntBASIC16.87■□□□□ 0.29
SP9P0CG40 AL138918.1-201ENST00000568306 659 ntBASIC16.87■□□□□ 0.29
SP9P0CG40 AC106886.1-201ENST00000568660 600 ntBASIC16.87■□□□□ 0.29
SP9P0CG40 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.87■□□□□ 0.29
SP9P0CG40 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.87■□□□□ 0.29
SP9P0CG40 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SP9P0CG40 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.87■□□□□ 0.29
SP9P0CG40 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SP9P0CG40 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SP9P0CG40 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SP9P0CG40 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SP9P0CG40 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SP9P0CG40 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 AP3S2-216ENST00000617003 1561 ntBASIC16.86■□□□□ 0.29
SP9P0CG40 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.86■□□□□ 0.29
SP9P0CG40 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.86■□□□□ 0.29
SP9P0CG40 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.86■□□□□ 0.29
SP9P0CG40 SLC25A6P5-201ENST00000435663 894 ntBASIC16.86■□□□□ 0.29
SP9P0CG40 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.86■□□□□ 0.29
SP9P0CG40 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.86■□□□□ 0.29
SP9P0CG40 AC011495.1-201ENST00000498085 584 ntBASIC16.86■□□□□ 0.29
SP9P0CG40 AL031055.1-201ENST00000606362 631 ntBASIC16.86■□□□□ 0.29
SP9P0CG40 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.86■□□□□ 0.29
SP9P0CG40 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.86■□□□□ 0.29
SP9P0CG40 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.86■□□□□ 0.29
SP9P0CG40 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SP9P0CG40 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.86■□□□□ 0.29
SP9P0CG40 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SP9P0CG40 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.86■□□□□ 0.29
SP9P0CG40 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.86■□□□□ 0.29
SP9P0CG40 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SP9P0CG40 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SP9P0CG40 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SP9P0CG40 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.85■□□□□ 0.29
SP9P0CG40 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SP9P0CG40 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SP9P0CG40 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.85■□□□□ 0.29
SP9P0CG40 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SP9P0CG40 RNU1-129P-201ENST00000384064 167 ntBASIC16.85■□□□□ 0.29
SP9P0CG40 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.85■□□□□ 0.29
SP9P0CG40 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
SP9P0CG40 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.85■□□□□ 0.29
SP9P0CG40 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.85■□□□□ 0.29
SP9P0CG40 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.85■□□□□ 0.29
SP9P0CG40 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.85■□□□□ 0.29
SP9P0CG40 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.85■□□□□ 0.29
SP9P0CG40 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.85■□□□□ 0.29
SP9P0CG40 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.85■□□□□ 0.29
SP9P0CG40 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SP9P0CG40 U1.21-201ENST00000580816 167 ntBASIC16.85■□□□□ 0.29
SP9P0CG40 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.85■□□□□ 0.29
SP9P0CG40 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.85■□□□□ 0.29
SP9P0CG40 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.85■□□□□ 0.29
SP9P0CG40 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SP9P0CG40 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 AC087499.5-201ENST00000452760 1342 ntBASIC16.85■□□□□ 0.29
SP9P0CG40 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.85■□□□□ 0.29
SP9P0CG40 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 AL353732.1-201ENST00000569618 1459 ntBASIC16.85■□□□□ 0.29
SP9P0CG40 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 AC016027.1-202ENST00000607927 1699 ntBASIC16.85■□□□□ 0.29
SP9P0CG40 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SP9P0CG40 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP9P0CG40 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.84■□□□□ 0.29
SP9P0CG40 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms