Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 ELK2BP-201ENST00000415014 1224 ntBASIC16.23■□□□□ 0.19
PDGFAP04085 AC122714.2-201ENST00000502787 707 ntBASIC16.23■□□□□ 0.19
PDGFAP04085 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.23■□□□□ 0.19
PDGFAP04085 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.23■□□□□ 0.19
PDGFAP04085 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
PDGFAP04085 AC018845.2-201ENST00000568326 409 ntBASIC16.23■□□□□ 0.19
PDGFAP04085 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
PDGFAP04085 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 KRT8P47-201ENST00000604727 1398 ntBASIC16.23■□□□□ 0.19
PDGFAP04085 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.23■□□□□ 0.19
PDGFAP04085 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDGFAP04085 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PDGFAP04085 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.22■□□□□ 0.19
PDGFAP04085 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 GMCL1P1-201ENST00000463439 1581 ntBASIC16.22■□□□□ 0.19
PDGFAP04085 AC006504.4-201ENST00000592118 1568 ntBASIC16.22■□□□□ 0.19
PDGFAP04085 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.22■□□□□ 0.19
PDGFAP04085 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PDGFAP04085 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.22■□□□□ 0.19
PDGFAP04085 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.22■□□□□ 0.19
PDGFAP04085 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDGFAP04085 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PDGFAP04085 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.22■□□□□ 0.19
PDGFAP04085 RFPL4AP1-201ENST00000530883 850 ntBASIC16.22■□□□□ 0.19
PDGFAP04085 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.22■□□□□ 0.19
PDGFAP04085 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.22■□□□□ 0.19
PDGFAP04085 AC073592.5-201ENST00000624854 528 ntBASIC16.22■□□□□ 0.19
PDGFAP04085 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDGFAP04085 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.22■□□□□ 0.19
PDGFAP04085 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDGFAP04085 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDGFAP04085 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFAP04085 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PDGFAP04085 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 ESPNP-201ENST00000270691 2015 ntBASIC16.21■□□□□ 0.19
PDGFAP04085 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.21■□□□□ 0.19
PDGFAP04085 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.21■□□□□ 0.19
PDGFAP04085 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.21■□□□□ 0.19
PDGFAP04085 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.21■□□□□ 0.19
PDGFAP04085 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.21■□□□□ 0.19
PDGFAP04085 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.21■□□□□ 0.19
PDGFAP04085 CYMP-203ENST00000474680 1263 ntBASIC16.21■□□□□ 0.19
PDGFAP04085 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PDGFAP04085 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.21■□□□□ 0.19
PDGFAP04085 SNHG9-202ENST00000564014 471 ntBASIC16.21■□□□□ 0.19
PDGFAP04085 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.21■□□□□ 0.19
PDGFAP04085 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.21■□□□□ 0.19
PDGFAP04085 AL513190.1-201ENST00000621254 727 ntBASIC16.21■□□□□ 0.19
PDGFAP04085 AC004706.3-202ENST00000621574 984 ntBASIC16.21■□□□□ 0.19
PDGFAP04085 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFAP04085 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.21■□□□□ 0.19
PDGFAP04085 ANO7L1-203ENST00000602586 1720 ntBASIC16.21■□□□□ 0.19
PDGFAP04085 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PDGFAP04085 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms