Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.18■□□□□ 0.5
APOEP02649 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
APOEP02649 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APOEP02649 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APOEP02649 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APOEP02649 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APOEP02649 SPDYE21P-201ENST00000413323 827 ntBASIC18.18■□□□□ 0.5
APOEP02649 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APOEP02649 AL020989.1-201ENST00000422979 469 ntBASIC18.18■□□□□ 0.5
APOEP02649 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 AC073648.2-201ENST00000510116 352 ntBASIC18.18■□□□□ 0.5
APOEP02649 STK19B-204ENST00000512515 211 ntBASIC18.18■□□□□ 0.5
APOEP02649 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.18■□□□□ 0.5
APOEP02649 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.18■□□□□ 0.5
APOEP02649 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 AC132938.5-201ENST00000624980 1813 ntBASIC18.18■□□□□ 0.5
APOEP02649 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APOEP02649 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.18■□□□□ 0.5
APOEP02649 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APOEP02649 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APOEP02649 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.17■□□□□ 0.5
APOEP02649 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.17■□□□□ 0.5
APOEP02649 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
APOEP02649 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
APOEP02649 AP002469.2-201ENST00000531724 424 ntBASIC18.17■□□□□ 0.5
APOEP02649 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.17■□□□□ 0.5
APOEP02649 AC104692.2-201ENST00000603054 253 ntBASIC18.17■□□□□ 0.5
APOEP02649 AC064862.7-201ENST00000604520 867 ntBASIC18.17■□□□□ 0.5
APOEP02649 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.17■□□□□ 0.5
APOEP02649 TP73-AS1-207ENST00000624167 988 ntBASIC18.17■□□□□ 0.5
APOEP02649 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.17■□□□□ 0.5
APOEP02649 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.17■□□□□ 0.5
APOEP02649 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
APOEP02649 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.17■□□□□ 0.5
APOEP02649 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.17■□□□□ 0.5
APOEP02649 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 FER1L4-210ENST00000615531 5998 ntBASIC18.17■□□□□ 0.5
APOEP02649 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.17■□□□□ 0.5
APOEP02649 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APOEP02649 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
APOEP02649 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 SIGLEC16-201ENST00000599858 1437 ntBASIC18.16■□□□□ 0.5
APOEP02649 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 AC133963.1-201ENST00000504166 1679 ntBASIC18.16■□□□□ 0.5
APOEP02649 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
APOEP02649 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
APOEP02649 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
APOEP02649 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 FAM197Y8-203ENST00000450145 560 ntBASIC18.16■□□□□ 0.5
APOEP02649 AF186996.4-201ENST00000467186 377 ntBASIC18.16■□□□□ 0.5
APOEP02649 SART3-203ENST00000546611 1184 ntBASIC18.16■□□□□ 0.5
APOEP02649 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.16■□□□□ 0.5
APOEP02649 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.16■□□□□ 0.5
APOEP02649 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 NKAPP1-205ENST00000585790 367 ntBASIC18.16■□□□□ 0.5
APOEP02649 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.16■□□□□ 0.5
APOEP02649 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.16■□□□□ 0.5
APOEP02649 AC073592.4-201ENST00000623827 446 ntBASIC18.16■□□□□ 0.5
APOEP02649 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.16■□□□□ 0.5
APOEP02649 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOEP02649 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms