Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFBP01127 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFBP01127 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDGFBP01127 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDGFBP01127 WASH6P-202ENST00000359512 1437 ntBASIC17.25■□□□□ 0.35
PDGFBP01127 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFBP01127 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PDGFBP01127 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PDGFBP01127 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFBP01127 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDGFBP01127 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 AC092658.1-201ENST00000505836 891 ntBASIC17.25■□□□□ 0.35
PDGFBP01127 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDGFBP01127 AC140912.1-201ENST00000577171 1054 ntBASIC17.25■□□□□ 0.35
PDGFBP01127 AC008738.7-201ENST00000609744 511 ntBASIC17.25■□□□□ 0.35
PDGFBP01127 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.25■□□□□ 0.35
PDGFBP01127 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PDGFBP01127 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PDGFBP01127 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDGFBP01127 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFBP01127 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDGFBP01127 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.24■□□□□ 0.35
PDGFBP01127 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
PDGFBP01127 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.24■□□□□ 0.35
PDGFBP01127 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PDGFBP01127 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 MIR6805-201ENST00000615055 62 ntBASIC17.24■□□□□ 0.35
PDGFBP01127 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFBP01127 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFBP01127 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDGFBP01127 AC046185.3-201ENST00000623228 1824 ntBASIC17.24■□□□□ 0.35
PDGFBP01127 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
PDGFBP01127 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.23■□□□□ 0.35
PDGFBP01127 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 AC009407.1-201ENST00000568958 598 ntBASIC17.23■□□□□ 0.35
PDGFBP01127 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.23■□□□□ 0.35
PDGFBP01127 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFBP01127 AC003101.2-201ENST00000612557 442 ntBASIC17.23■□□□□ 0.35
PDGFBP01127 AL162274.1-201ENST00000617191 1098 ntBASIC17.23■□□□□ 0.35
PDGFBP01127 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDGFBP01127 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFBP01127 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFBP01127 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms