Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.39■□□□□ 0.54
LCA5LO95447 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LCA5LO95447 HLA-A-202ENST00000376806 1854 ntBASIC18.39■□□□□ 0.54
LCA5LO95447 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LCA5LO95447 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LCA5LO95447 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
LCA5LO95447 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LCA5LO95447 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.39■□□□□ 0.53
LCA5LO95447 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.39■□□□□ 0.53
LCA5LO95447 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.39■□□□□ 0.53
LCA5LO95447 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
LCA5LO95447 TSPY22P-201ENST00000427496 604 ntBASIC18.39■□□□□ 0.53
LCA5LO95447 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 STK19B-204ENST00000512515 211 ntBASIC18.39■□□□□ 0.53
LCA5LO95447 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.39■□□□□ 0.53
LCA5LO95447 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
LCA5LO95447 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LCA5LO95447 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LCA5LO95447 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
LCA5LO95447 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LCA5LO95447 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LCA5LO95447 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCA5LO95447 AC046158.3-201ENST00000624947 2558 ntBASIC18.38■□□□□ 0.53
LCA5LO95447 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
LCA5LO95447 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
LCA5LO95447 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.38■□□□□ 0.53
LCA5LO95447 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.38■□□□□ 0.53
LCA5LO95447 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.38■□□□□ 0.53
LCA5LO95447 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.38■□□□□ 0.53
LCA5LO95447 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.38■□□□□ 0.53
LCA5LO95447 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 AC003669.1-201ENST00000334569 611 ntBASIC18.38■□□□□ 0.53
LCA5LO95447 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LCA5LO95447 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.38■□□□□ 0.53
LCA5LO95447 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 AL645929.1-201ENST00000420084 975 ntBASIC18.38■□□□□ 0.53
LCA5LO95447 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.38■□□□□ 0.53
LCA5LO95447 KRT18P57-201ENST00000443599 1254 ntBASIC18.38■□□□□ 0.53
LCA5LO95447 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LCA5LO95447 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.38■□□□□ 0.53
LCA5LO95447 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.38■□□□□ 0.53
LCA5LO95447 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.38■□□□□ 0.53
LCA5LO95447 AC090616.6-201ENST00000582640 721 ntBASIC18.38■□□□□ 0.53
LCA5LO95447 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.38■□□□□ 0.53
LCA5LO95447 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.38■□□□□ 0.53
LCA5LO95447 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.38■□□□□ 0.53
LCA5LO95447 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCA5LO95447 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
LCA5LO95447 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LCA5LO95447 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.37■□□□□ 0.53
LCA5LO95447 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.37■□□□□ 0.53
LCA5LO95447 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.37■□□□□ 0.53
LCA5LO95447 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
LCA5LO95447 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCA5LO95447 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms