Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.56□□□□□ -0.24
ZNF253O75346 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.56□□□□□ -0.24
ZNF253O75346 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.56□□□□□ -0.24
ZNF253O75346 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.56□□□□□ -0.24
ZNF253O75346 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.56□□□□□ -0.24
ZNF253O75346 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ZNF253O75346 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 AC009947.2-201ENST00000444014 672 ntBASIC13.56□□□□□ -0.24
ZNF253O75346 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
ZNF253O75346 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 AC024243.1-201ENST00000609234 778 ntBASIC13.56□□□□□ -0.24
ZNF253O75346 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.56□□□□□ -0.24
ZNF253O75346 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF253O75346 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF253O75346 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.55□□□□□ -0.24
ZNF253O75346 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ZNF253O75346 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 AL390955.1-201ENST00000428694 934 ntBASIC13.55□□□□□ -0.24
ZNF253O75346 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.55□□□□□ -0.24
ZNF253O75346 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.55□□□□□ -0.24
ZNF253O75346 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZNF253O75346 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.55□□□□□ -0.24
ZNF253O75346 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms