Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC011467.4-201ENST00000594891 528 ntBASIC20.15■□□□□ 0.82
CTNND1O60716 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.15■□□□□ 0.82
CTNND1O60716 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 AL645728.2-201ENST00000641974 660 ntBASIC20.15■□□□□ 0.82
CTNND1O60716 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTNND1O60716 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CTNND1O60716 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTNND1O60716 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CTNND1O60716 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTNND1O60716 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.15■□□□□ 0.82
CTNND1O60716 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTNND1O60716 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTNND1O60716 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 AC138932.1-201ENST00000534164 6830 ntBASIC20.15■□□□□ 0.82
CTNND1O60716 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CTNND1O60716 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CTNND1O60716 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CTNND1O60716 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.14■□□□□ 0.81
CTNND1O60716 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.14■□□□□ 0.81
CTNND1O60716 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.14■□□□□ 0.81
CTNND1O60716 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CTNND1O60716 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.14■□□□□ 0.81
CTNND1O60716 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.14■□□□□ 0.81
CTNND1O60716 AC140658.5-201ENST00000438532 169 ntBASIC20.14■□□□□ 0.81
CTNND1O60716 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.14■□□□□ 0.81
CTNND1O60716 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CTNND1O60716 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CTNND1O60716 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
CTNND1O60716 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.14■□□□□ 0.81
CTNND1O60716 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CTNND1O60716 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.14■□□□□ 0.81
CTNND1O60716 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTNND1O60716 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CTNND1O60716 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CTNND1O60716 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.13■□□□□ 0.81
CTNND1O60716 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.13■□□□□ 0.81
CTNND1O60716 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CTNND1O60716 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CTNND1O60716 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CTNND1O60716 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.13■□□□□ 0.81
CTNND1O60716 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.13■□□□□ 0.81
CTNND1O60716 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.13■□□□□ 0.81
CTNND1O60716 AC109322.1-201ENST00000524499 1264 ntBASIC20.13■□□□□ 0.81
CTNND1O60716 FAM86C2P-203ENST00000528684 1004 ntBASIC20.13■□□□□ 0.81
CTNND1O60716 SPCS2P1-201ENST00000561636 679 ntBASIC20.13■□□□□ 0.81
CTNND1O60716 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.13■□□□□ 0.81
CTNND1O60716 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CTNND1O60716 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CTNND1O60716 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CTNND1O60716 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CTNND1O60716 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CTNND1O60716 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTNND1O60716 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.12■□□□□ 0.81
CTNND1O60716 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CTNND1O60716 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CTNND1O60716 AC107918.2-201ENST00000530817 355 ntBASIC20.12■□□□□ 0.81
CTNND1O60716 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.12■□□□□ 0.81
CTNND1O60716 AC026120.1-201ENST00000611536 926 ntBASIC20.12■□□□□ 0.81
CTNND1O60716 AC093512.1-201ENST00000617969 520 ntBASIC20.12■□□□□ 0.81
CTNND1O60716 LINC00628-201ENST00000628516 1289 ntBASIC20.12■□□□□ 0.81
CTNND1O60716 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CTNND1O60716 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.12■□□□□ 0.81
CTNND1O60716 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms