Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.66■□□□□ 0.26
GFRA3O60609 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
GFRA3O60609 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.66■□□□□ 0.26
GFRA3O60609 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
GFRA3O60609 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFRA3O60609 AC100803.2-201ENST00000562459 1963 ntBASIC16.66■□□□□ 0.26
GFRA3O60609 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GFRA3O60609 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.65■□□□□ 0.26
GFRA3O60609 CETN4P-206ENST00000642099 2168 ntBASIC16.65■□□□□ 0.26
GFRA3O60609 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GFRA3O60609 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GFRA3O60609 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GFRA3O60609 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
GFRA3O60609 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GFRA3O60609 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.65■□□□□ 0.26
GFRA3O60609 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.65■□□□□ 0.26
GFRA3O60609 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.65■□□□□ 0.26
GFRA3O60609 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.65■□□□□ 0.26
GFRA3O60609 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.65■□□□□ 0.26
GFRA3O60609 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.65■□□□□ 0.26
GFRA3O60609 AC106872.11-201ENST00000605838 421 ntBASIC16.65■□□□□ 0.26
GFRA3O60609 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 BTBD7P1-201ENST00000447253 1453 ntBASIC16.65■□□□□ 0.26
GFRA3O60609 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GFRA3O60609 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GFRA3O60609 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.65■□□□□ 0.26
GFRA3O60609 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.65■□□□□ 0.26
GFRA3O60609 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFRA3O60609 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.64■□□□□ 0.26
GFRA3O60609 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GFRA3O60609 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GFRA3O60609 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
GFRA3O60609 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
GFRA3O60609 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
GFRA3O60609 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
GFRA3O60609 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 KRT43P-201ENST00000434019 910 ntBASIC16.64■□□□□ 0.25
GFRA3O60609 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 AC108725.1-201ENST00000495472 409 ntBASIC16.64■□□□□ 0.25
GFRA3O60609 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.64■□□□□ 0.25
GFRA3O60609 AKR1B10P2-201ENST00000577332 927 ntBASIC16.64■□□□□ 0.25
GFRA3O60609 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.64■□□□□ 0.25
GFRA3O60609 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.64■□□□□ 0.25
GFRA3O60609 AC243960.2-201ENST00000600996 747 ntBASIC16.64■□□□□ 0.25
GFRA3O60609 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 AC244517.3-201ENST00000616254 1235 ntBASIC16.64■□□□□ 0.25
GFRA3O60609 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
GFRA3O60609 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.64■□□□□ 0.25
GFRA3O60609 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.64■□□□□ 0.25
GFRA3O60609 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.64■□□□□ 0.25
GFRA3O60609 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GFRA3O60609 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 AL499627.1-201ENST00000569373 2188 ntBASIC16.64■□□□□ 0.25
GFRA3O60609 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GFRA3O60609 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
GFRA3O60609 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFRA3O60609 AL035456.1-201ENST00000456064 1369 ntBASIC16.64■□□□□ 0.25
GFRA3O60609 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.63■□□□□ 0.25
GFRA3O60609 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.63■□□□□ 0.25
GFRA3O60609 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.63■□□□□ 0.25
GFRA3O60609 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFRA3O60609 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms