Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC104109.2-201ENST00000602919 1418 ntBASIC17.47■□□□□ 0.39
TRIM38O00635 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRIM38O00635 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM38O00635 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM38O00635 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM38O00635 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.47■□□□□ 0.39
TRIM38O00635 BX842568.4-201ENST00000421222 227 ntBASIC17.47■□□□□ 0.39
TRIM38O00635 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM38O00635 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM38O00635 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM38O00635 AC012640.2-201ENST00000561606 901 ntBASIC17.47■□□□□ 0.39
TRIM38O00635 AC145285.3-201ENST00000564603 959 ntBASIC17.47■□□□□ 0.39
TRIM38O00635 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM38O00635 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM38O00635 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM38O00635 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM38O00635 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM38O00635 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRIM38O00635 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 AC022211.2-201ENST00000585075 2527 ntBASIC17.47■□□□□ 0.39
TRIM38O00635 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM38O00635 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRIM38O00635 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM38O00635 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRIM38O00635 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM38O00635 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM38O00635 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.46■□□□□ 0.39
TRIM38O00635 AC025062.2-201ENST00000605477 670 ntBASIC17.46■□□□□ 0.39
TRIM38O00635 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM38O00635 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
TRIM38O00635 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM38O00635 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 HLA-J-201ENST00000462773 1622 ntBASIC17.46■□□□□ 0.39
TRIM38O00635 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM38O00635 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM38O00635 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM38O00635 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.38
TRIM38O00635 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM38O00635 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 AP001094.4-201ENST00000579008 2176 ntBASIC17.45■□□□□ 0.38
TRIM38O00635 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRIM38O00635 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM38O00635 AC092910.1-201ENST00000482027 1129 ntBASIC17.45■□□□□ 0.38
TRIM38O00635 OR7E14P-202ENST00000530490 1290 ntBASIC17.45■□□□□ 0.38
TRIM38O00635 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM38O00635 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
TRIM38O00635 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM38O00635 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 NKILA-202ENST00000614771 2598 ntBASIC17.45■□□□□ 0.38
TRIM38O00635 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM38O00635 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM38O00635 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms