Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
FOXN3O00409 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXN3O00409 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXN3O00409 AC138894.3-201ENST00000603787 634 ntBASIC18.56■□□□□ 0.56
FOXN3O00409 AL591684.3-201ENST00000605187 298 ntBASIC18.56■□□□□ 0.56
FOXN3O00409 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXN3O00409 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXN3O00409 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FOXN3O00409 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
FOXN3O00409 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXN3O00409 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
FOXN3O00409 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXN3O00409 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
FOXN3O00409 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
FOXN3O00409 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FOXN3O00409 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.55■□□□□ 0.56
FOXN3O00409 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
FOXN3O00409 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXN3O00409 KRT16P4-201ENST00000453883 522 ntBASIC18.55■□□□□ 0.56
FOXN3O00409 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXN3O00409 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXN3O00409 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
FOXN3O00409 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
FOXN3O00409 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
FOXN3O00409 EGFEM1P-202ENST00000431685 1563 ntBASIC18.55■□□□□ 0.56
FOXN3O00409 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
FOXN3O00409 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN3O00409 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 AC092068.3-201ENST00000587894 2016 ntBASIC18.54■□□□□ 0.56
FOXN3O00409 AC005915.1-201ENST00000624912 2018 ntBASIC18.54■□□□□ 0.56
FOXN3O00409 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
FOXN3O00409 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FOXN3O00409 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FOXN3O00409 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
FOXN3O00409 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXN3O00409 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXN3O00409 SPDYE21P-201ENST00000413323 827 ntBASIC18.54■□□□□ 0.56
FOXN3O00409 AL020989.1-201ENST00000422979 469 ntBASIC18.54■□□□□ 0.56
FOXN3O00409 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXN3O00409 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.54■□□□□ 0.56
FOXN3O00409 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXN3O00409 AC132008.2-207ENST00000454517 770 ntBASIC18.54■□□□□ 0.56
FOXN3O00409 FOSL1P1-201ENST00000511041 816 ntBASIC18.54■□□□□ 0.56
FOXN3O00409 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.54■□□□□ 0.56
FOXN3O00409 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.54■□□□□ 0.56
FOXN3O00409 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.54■□□□□ 0.56
FOXN3O00409 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXN3O00409 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXN3O00409 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
FOXN3O00409 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXN3O00409 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXN3O00409 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
FOXN3O00409 AC084018.2-201ENST00000613093 2607 ntBASIC18.53■□□□□ 0.56
FOXN3O00409 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 AC105020.1-201ENST00000435356 2205 ntBASIC18.53■□□□□ 0.56
FOXN3O00409 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
FOXN3O00409 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXN3O00409 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXN3O00409 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms