Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KRT8P10-201ENST00000450021 1447 ntBASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 RN7SL606P-201ENST00000472779 293 ntBASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 AC091304.2-201ENST00000564639 760 ntBASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 AC099336.1-202ENST00000602961 463 ntBASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 AC009102.3-201ENST00000623118 1491 ntBASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 AC046158.3-201ENST00000624947 2558 ntBASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 AC104819.1-201ENST00000504587 486 ntBASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 AC004263.2-201ENST00000617183 678 ntBASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 AL163051.1-201ENST00000569214 1512 ntBASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX49Q9Y6V7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 PCDHB19P-201ENST00000570871 2371 ntBASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 IGHV3-47-201ENST00000425060 335 ntBASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 MIR3180-4-201ENST00000582223 153 ntBASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 AC090616.6-201ENST00000582640 721 ntBASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX49Q9Y6V7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 AL353692.3-201ENST00000407031 1396 ntBASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms