Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 PCDHA12-202ENST00000613593 2588 ntBASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 AC084018.2-201ENST00000613093 2607 ntBASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AC096633.1-201ENST00000422446 749 ntBASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AC122714.2-201ENST00000502787 707 ntBASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AL356488.2-201ENST00000602755 427 ntBASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA3Q9Y5H0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 AL513477.1-201ENST00000602865 2407 ntBASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 AC079776.2-201ENST00000641154 1609 ntBASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 NFIC-211ENST00000641145 8399 ntBASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 AC005104.2-201ENST00000427818 678 ntBASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 AC092183.1-201ENST00000469884 875 ntBASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 AC073592.4-201ENST00000623827 446 ntBASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA3Q9Y5H0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA3Q9Y5H0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PCDHGA3Q9Y5H0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA3Q9Y5H0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms