Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 AL512384.1-201ENST00000406683 331 ntBASIC18.16■□□□□ 0.5
CHD7Q9P2D1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 AL162274.1-201ENST00000617191 1098 ntBASIC18.16■□□□□ 0.5
CHD7Q9P2D1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 SPDYE12P-201ENST00000618416 771 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 AC138969.3-201ENST00000546612 1459 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 AC138932.2-201ENST00000548268 1459 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 AC126755.4-201ENST00000549796 1459 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 AC046185.3-201ENST00000623228 1824 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 TP53TG3HP-202ENST00000569755 579 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 AC132938.2-201ENST00000579188 680 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 AL591163.1-201ENST00000641757 987 ntBASIC18.15■□□□□ 0.5
CHD7Q9P2D1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD7Q9P2D1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CHD7Q9P2D1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHD7Q9P2D1 WIZP1-201ENST00000531444 2299 ntBASIC18.14■□□□□ 0.5
CHD7Q9P2D1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.14■□□□□ 0.49
CHD7Q9P2D1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 AL512638.1-201ENST00000457493 794 ntBASIC18.13■□□□□ 0.49
CHD7Q9P2D1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHD7Q9P2D1 AC027369.6-201ENST00000525520 931 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms