Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 CROCCP2-202ENST00000412962 2773 ntBASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP1AQ9HD42 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 LINC00167-201ENST00000530583 1419 ntBASIC15□□□□□ -0.01
CHMP1AQ9HD42 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 HLA-J-201ENST00000462773 1622 ntBASIC15□□□□□ -0.01
CHMP1AQ9HD42 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 AC010947.1-201ENST00000623454 693 ntBASIC15□□□□□ -0.01
CHMP1AQ9HD42 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15□□□□□ -0.01
CHMP1AQ9HD42 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP1AQ9HD42 KRT8P9-201ENST00000558927 1449 ntBASIC15□□□□□ -0.01
CHMP1AQ9HD42 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 AC009949.1-201ENST00000623048 1830 ntBASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 AC034232.1-201ENST00000506026 1064 ntBASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 TMEM191A-211ENST00000637163 1067 ntBASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP1AQ9HD42 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms