Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH20Q9HBT6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CDH20Q9HBT6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.21■□□□□ 0.02
CDH20Q9HBT6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.21■□□□□ 0.02
CDH20Q9HBT6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CDH20Q9HBT6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDH20Q9HBT6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH20Q9HBT6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH20Q9HBT6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 AL049757.1-201ENST00000616842 1596 ntBASIC15.2■□□□□ 0.02
CDH20Q9HBT6 AC106820.2-201ENST00000563775 3264 ntBASIC15.2■□□□□ 0.02
CDH20Q9HBT6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 AC003669.1-201ENST00000334569 611 ntBASIC15.2■□□□□ 0.02
CDH20Q9HBT6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 KRT126P-201ENST00000549467 1181 ntBASIC15.2■□□□□ 0.02
CDH20Q9HBT6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.2■□□□□ 0.02
CDH20Q9HBT6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 AL353593.2-201ENST00000602529 1483 ntBASIC15.2■□□□□ 0.02
CDH20Q9HBT6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 AC067852.2-201ENST00000590513 2313 ntBASIC15.2■□□□□ 0.02
CDH20Q9HBT6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH20Q9HBT6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AC004870.1-201ENST00000315132 882 ntBASIC15.19■□□□□ 0.02
CDH20Q9HBT6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 RBM17P3-201ENST00000417687 1192 ntBASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 SAPCD2P3-201ENST00000455031 850 ntBASIC15.19■□□□□ 0.02
CDH20Q9HBT6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AL139327.4-201ENST00000612362 153 ntBASIC15.19■□□□□ 0.02
CDH20Q9HBT6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 AD001527.2-201ENST00000622994 785 ntBASIC15.19■□□□□ 0.02
CDH20Q9HBT6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDH20Q9HBT6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms