Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 KLF4P1-201ENST00000412782 1185 ntBASIC20.15■□□□□ 0.82
EFCC1Q9HA90 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 AC005225.4-201ENST00000557330 545 ntBASIC20.15■□□□□ 0.82
EFCC1Q9HA90 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 AC022145.2-201ENST00000598203 171 ntBASIC20.15■□□□□ 0.82
EFCC1Q9HA90 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 AC023141.13-201ENST00000604991 943 ntBASIC20.15■□□□□ 0.82
EFCC1Q9HA90 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.15■□□□□ 0.82
EFCC1Q9HA90 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFCC1Q9HA90 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
EFCC1Q9HA90 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 AC087641.1-201ENST00000557561 1021 ntBASIC20.14■□□□□ 0.81
EFCC1Q9HA90 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 AC019129.2-201ENST00000609837 1235 ntBASIC20.14■□□□□ 0.81
EFCC1Q9HA90 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 AL805961.1-202ENST00000641562 540 ntBASIC20.14■□□□□ 0.81
EFCC1Q9HA90 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFCC1Q9HA90 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.13■□□□□ 0.81
EFCC1Q9HA90 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 SIGLEC30P-201ENST00000455569 941 ntBASIC20.13■□□□□ 0.81
EFCC1Q9HA90 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 AC067863.1-201ENST00000494933 530 ntBASIC20.13■□□□□ 0.81
EFCC1Q9HA90 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 REXO1L3P-201ENST00000622202 1288 ntBASIC20.13■□□□□ 0.81
EFCC1Q9HA90 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFCC1Q9HA90 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms