Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.9■□□□□ 0.46
CDX2Q99626 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.9■□□□□ 0.46
CDX2Q99626 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.9■□□□□ 0.46
CDX2Q99626 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.9■□□□□ 0.46
CDX2Q99626 AL589739.1-201ENST00000607720 493 ntBASIC17.9■□□□□ 0.46
CDX2Q99626 AC004790.1-201ENST00000612686 536 ntBASIC17.9■□□□□ 0.46
CDX2Q99626 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.9■□□□□ 0.46
CDX2Q99626 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDX2Q99626 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDX2Q99626 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDX2Q99626 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX2Q99626 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDX2Q99626 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX2Q99626 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.9■□□□□ 0.46
CDX2Q99626 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CDX2Q99626 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDX2Q99626 AC007952.6-201ENST00000573168 2673 ntBASIC17.89■□□□□ 0.45
CDX2Q99626 AC003957.1-201ENST00000625108 2673 ntBASIC17.89■□□□□ 0.45
CDX2Q99626 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX2Q99626 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX2Q99626 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX2Q99626 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX2Q99626 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CDX2Q99626 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX2Q99626 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX2Q99626 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX2Q99626 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDX2Q99626 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX2Q99626 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.89■□□□□ 0.45
CDX2Q99626 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.89■□□□□ 0.45
CDX2Q99626 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.89■□□□□ 0.45
CDX2Q99626 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CDX2Q99626 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX2Q99626 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDX2Q99626 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX2Q99626 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX2Q99626 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX2Q99626 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDX2Q99626 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX2Q99626 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX2Q99626 SLC7A15P-201ENST00000424028 1363 ntBASIC17.89■□□□□ 0.45
CDX2Q99626 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX2Q99626 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CDX2Q99626 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX2Q99626 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX2Q99626 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX2Q99626 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX2Q99626 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.88■□□□□ 0.45
CDX2Q99626 AC016027.1-202ENST00000607927 1699 ntBASIC17.88■□□□□ 0.45
CDX2Q99626 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.88■□□□□ 0.45
CDX2Q99626 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDX2Q99626 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.88■□□□□ 0.45
CDX2Q99626 BOLA2P3-201ENST00000404566 256 ntBASIC17.88■□□□□ 0.45
CDX2Q99626 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDX2Q99626 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 AC099548.2-209ENST00000480264 625 ntBASIC17.88■□□□□ 0.45
CDX2Q99626 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 RHOQP1-201ENST00000555758 579 ntBASIC17.88■□□□□ 0.45
CDX2Q99626 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.88■□□□□ 0.45
CDX2Q99626 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.88■□□□□ 0.45
CDX2Q99626 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDX2Q99626 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.88■□□□□ 0.45
CDX2Q99626 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX2Q99626 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDX2Q99626 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDX2Q99626 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CDX2Q99626 AL137060.1-201ENST00000618151 2648 ntBASIC17.87■□□□□ 0.45
CDX2Q99626 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDX2Q99626 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDX2Q99626 BRWD1P1-201ENST00000401091 371 ntBASIC17.87■□□□□ 0.45
CDX2Q99626 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.87■□□□□ 0.45
CDX2Q99626 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.87■□□□□ 0.45
CDX2Q99626 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.87■□□□□ 0.45
CDX2Q99626 MTND6P24-201ENST00000440466 518 ntBASIC17.87■□□□□ 0.45
CDX2Q99626 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms