Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NDNQ99608 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.44■□□□□ 0.38
NDNQ99608 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.44■□□□□ 0.38
NDNQ99608 AC091607.1-201ENST00000490318 1060 ntBASIC17.44■□□□□ 0.38
NDNQ99608 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
NDNQ99608 AL139327.4-201ENST00000612362 153 ntBASIC17.44■□□□□ 0.38
NDNQ99608 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 AC125634.1-201ENST00000438758 1403 ntBASIC17.44■□□□□ 0.38
NDNQ99608 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NDNQ99608 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.43■□□□□ 0.38
NDNQ99608 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NDNQ99608 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.43■□□□□ 0.38
NDNQ99608 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 FAM210CP-201ENST00000445714 574 ntBASIC17.43■□□□□ 0.38
NDNQ99608 FAM86EP-206ENST00000510506 987 ntBASIC17.43■□□□□ 0.38
NDNQ99608 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.43■□□□□ 0.38
NDNQ99608 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.43■□□□□ 0.38
NDNQ99608 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.43■□□□□ 0.38
NDNQ99608 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 AC011840.4-201ENST00000578471 627 ntBASIC17.43■□□□□ 0.38
NDNQ99608 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.43■□□□□ 0.38
NDNQ99608 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.43■□□□□ 0.38
NDNQ99608 AL353801.3-201ENST00000609898 542 ntBASIC17.43■□□□□ 0.38
NDNQ99608 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.43■□□□□ 0.38
NDNQ99608 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.43■□□□□ 0.38
NDNQ99608 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.43■□□□□ 0.38
NDNQ99608 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.43■□□□□ 0.38
NDNQ99608 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NDNQ99608 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.43■□□□□ 0.38
NDNQ99608 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.43■□□□□ 0.38
NDNQ99608 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.43■□□□□ 0.38
NDNQ99608 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.43■□□□□ 0.38
NDNQ99608 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDNQ99608 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NDNQ99608 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NDNQ99608 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.42■□□□□ 0.38
NDNQ99608 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NDNQ99608 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
NDNQ99608 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NDNQ99608 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.42■□□□□ 0.38
NDNQ99608 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.42■□□□□ 0.38
NDNQ99608 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.42■□□□□ 0.38
NDNQ99608 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.42■□□□□ 0.38
NDNQ99608 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.42■□□□□ 0.38
NDNQ99608 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NDNQ99608 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.42■□□□□ 0.38
NDNQ99608 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NDNQ99608 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDNQ99608 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NDNQ99608 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms