Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 AC026740.1-201ENST00000607068 791 ntBASIC16.83■□□□□ 0.28
CFAP54Q96N23 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CFAP54Q96N23 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 ZNF767P-206ENST00000513792 565 ntBASIC16.83■□□□□ 0.28
CFAP54Q96N23 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 AC008494.3-201ENST00000606615 944 ntBASIC16.83■□□□□ 0.28
CFAP54Q96N23 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 AC098818.2-201ENST00000564925 2320 ntBASIC16.82■□□□□ 0.28
CFAP54Q96N23 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 AC099548.2-209ENST00000480264 625 ntBASIC16.82■□□□□ 0.28
CFAP54Q96N23 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.82■□□□□ 0.28
CFAP54Q96N23 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CFAP54Q96N23 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 MYLKP1-201ENST00000509077 1580 ntBASIC16.81■□□□□ 0.28
CFAP54Q96N23 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 AC135776.1-201ENST00000319817 2481 ntBASIC16.81■□□□□ 0.28
CFAP54Q96N23 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CFAP54Q96N23 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP54Q96N23 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms