Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX27Q96L92 AC064836.3-201ENST00000607928 673 ntBASIC18.67■□□□□ 0.58
SNX27Q96L92 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 AC063926.2-201ENST00000623766 1308 ntBASIC18.67■□□□□ 0.58
SNX27Q96L92 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX27Q96L92 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNX27Q96L92 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SNX27Q96L92 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX27Q96L92 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNX27Q96L92 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNX27Q96L92 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SNX27Q96L92 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNX27Q96L92 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX27Q96L92 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNX27Q96L92 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX27Q96L92 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNX27Q96L92 PRSS29P-201ENST00000440800 595 ntBASIC18.66■□□□□ 0.58
SNX27Q96L92 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX27Q96L92 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX27Q96L92 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX27Q96L92 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX27Q96L92 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX27Q96L92 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX27Q96L92 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX27Q96L92 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX27Q96L92 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.66■□□□□ 0.58
SNX27Q96L92 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX27Q96L92 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNX27Q96L92 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX27Q96L92 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX27Q96L92 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX27Q96L92 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.65■□□□□ 0.58
SNX27Q96L92 DNAJB3-202ENST00000449667 1266 ntBASIC18.65■□□□□ 0.58
SNX27Q96L92 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
SNX27Q96L92 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.65■□□□□ 0.58
SNX27Q96L92 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.65■□□□□ 0.58
SNX27Q96L92 RNA5SP416-201ENST00000516838 111 ntBASIC18.65■□□□□ 0.58
SNX27Q96L92 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SNX27Q96L92 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 GGTLC5P-201ENST00000617623 998 ntBASIC18.65■□□□□ 0.58
SNX27Q96L92 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SNX27Q96L92 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX27Q96L92 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
SNX27Q96L92 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX27Q96L92 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SNX27Q96L92 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.64■□□□□ 0.58
SNX27Q96L92 AL138688.1-201ENST00000624851 1594 ntBASIC18.64■□□□□ 0.58
SNX27Q96L92 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX27Q96L92 PI4KAP1-204ENST00000612579 1703 ntBASIC18.64■□□□□ 0.57
SNX27Q96L92 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNX27Q96L92 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SNX27Q96L92 MIR770-201ENST00000390219 98 ntBASIC18.64■□□□□ 0.57
SNX27Q96L92 MRPL20P1-201ENST00000400819 433 ntBASIC18.64■□□□□ 0.57
SNX27Q96L92 VN2R19P-201ENST00000442399 1052 ntBASIC18.64■□□□□ 0.57
SNX27Q96L92 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX27Q96L92 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.64■□□□□ 0.57
SNX27Q96L92 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX27Q96L92 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 AC010654.1-201ENST00000615722 808 ntBASIC18.64■□□□□ 0.57
SNX27Q96L92 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX27Q96L92 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 AC067852.2-201ENST00000590513 2313 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms