Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 MIR346-201ENST00000362234 95 ntBASIC20.1■□□□□ 0.81
CDCA5Q96FF9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 AC027369.6-201ENST00000525520 931 ntBASIC20.1■□□□□ 0.81
CDCA5Q96FF9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 AC004233.3-201ENST00000607794 1269 ntBASIC20.1■□□□□ 0.81
CDCA5Q96FF9 AL590560.3-201ENST00000623350 461 ntBASIC20.1■□□□□ 0.81
CDCA5Q96FF9 AC073592.8-201ENST00000624126 511 ntBASIC20.1■□□□□ 0.81
CDCA5Q96FF9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 REXO1L11P-201ENST00000620964 1927 ntBASIC20.1■□□□□ 0.81
CDCA5Q96FF9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDCA5Q96FF9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 AC120498.9-201ENST00000339021 3867 ntBASIC20.08■□□□□ 0.81
CDCA5Q96FF9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 KRT18P55-202ENST00000578578 1546 ntBASIC20.08■□□□□ 0.81
CDCA5Q96FF9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 ATP5G2P4-201ENST00000442175 420 ntBASIC20.08■□□□□ 0.81
CDCA5Q96FF9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CDCA5Q96FF9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.08■□□□□ 0.8
CDCA5Q96FF9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDCA5Q96FF9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDCA5Q96FF9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.08■□□□□ 0.8
CDCA5Q96FF9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.08■□□□□ 0.8
CDCA5Q96FF9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDCA5Q96FF9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDCA5Q96FF9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 ARSEP1-201ENST00000420443 635 ntBASIC20.07■□□□□ 0.8
CDCA5Q96FF9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDCA5Q96FF9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms