Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 RNPS1P1-201ENST00000507437 918 ntBASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 AL031008.1-201ENST00000619963 541 ntBASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CTHRC1Q96CG8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 AC026396.1-201ENST00000419388 421 ntBASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 FAM197Y8-203ENST00000450145 560 ntBASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 AC080080.1-201ENST00000625121 2420 ntBASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 FRMD8P1-201ENST00000440433 1524 ntBASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CTHRC1Q96CG8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 AC060834.1-201ENST00000443027 2032 ntBASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 KRT18P67-201ENST00000432816 1264 ntBASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 AC073648.2-201ENST00000510116 352 ntBASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 AL160237.2-201ENST00000556165 472 ntBASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.03■□□□□ 0.16
CTHRC1Q96CG8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTHRC1Q96CG8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms