Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 SPTLC1P1-201ENST00000447199 261 ntBASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 KRT17P7-201ENST00000451704 1104 ntBASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 AC109635.5-201ENST00000533593 962 ntBASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 AC008267.7-201ENST00000624570 1194 ntBASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 AC135776.1-201ENST00000319817 2481 ntBASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 CU639417.3-201ENST00000624240 1404 ntBASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 AC012569.1-201ENST00000591191 1524 ntBASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 AP000997.3-201ENST00000623333 2250 ntBASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 AC027307.2-201ENST00000591252 911 ntBASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 AC073592.8-201ENST00000624126 511 ntBASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM43Q96BQ3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM43Q96BQ3 AC022144.1-201ENST00000602255 1580 ntBASIC18.64■□□□□ 0.58
TRIM43Q96BQ3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.64■□□□□ 0.58
TRIM43Q96BQ3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 WASH6P-202ENST00000359512 1437 ntBASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM43Q96BQ3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 CROCCP3-202ENST00000420820 1947 ntBASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 AC005412.3-201ENST00000580309 715 ntBASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM43Q96BQ3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms