Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HPS3Q969F9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.22■□□□□ 0.67
HPS3Q969F9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.22■□□□□ 0.67
HPS3Q969F9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.22■□□□□ 0.67
HPS3Q969F9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HPS3Q969F9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.22■□□□□ 0.67
HPS3Q969F9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 NUS1P1-201ENST00000446295 882 ntBASIC19.22■□□□□ 0.67
HPS3Q969F9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 KRT18P31-201ENST00000506277 1292 ntBASIC19.22■□□□□ 0.67
HPS3Q969F9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.22■□□□□ 0.67
HPS3Q969F9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.22■□□□□ 0.67
HPS3Q969F9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.22■□□□□ 0.67
HPS3Q969F9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.22■□□□□ 0.67
HPS3Q969F9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS3Q969F9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HPS3Q969F9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.21■□□□□ 0.67
HPS3Q969F9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 SPDYE21P-201ENST00000413323 827 ntBASIC19.21■□□□□ 0.67
HPS3Q969F9 TSPY19P-201ENST00000418461 509 ntBASIC19.21■□□□□ 0.67
HPS3Q969F9 TSPY18P-201ENST00000441642 509 ntBASIC19.21■□□□□ 0.67
HPS3Q969F9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.21■□□□□ 0.67
HPS3Q969F9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.21■□□□□ 0.67
HPS3Q969F9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
HPS3Q969F9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.21■□□□□ 0.67
HPS3Q969F9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.21■□□□□ 0.67
HPS3Q969F9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HPS3Q969F9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.21■□□□□ 0.67
HPS3Q969F9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.21■□□□□ 0.67
HPS3Q969F9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.21■□□□□ 0.67
HPS3Q969F9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS3Q969F9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HPS3Q969F9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HPS3Q969F9 AC011676.5-201ENST00000624864 2660 ntBASIC19.2■□□□□ 0.66
HPS3Q969F9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 LINC02012-201ENST00000608206 1725 ntBASIC19.2■□□□□ 0.66
HPS3Q969F9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS3Q969F9 AP005117.1-201ENST00000584346 1413 ntBASIC19.2■□□□□ 0.66
HPS3Q969F9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HPS3Q969F9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.2■□□□□ 0.66
HPS3Q969F9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HPS3Q969F9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.2■□□□□ 0.66
HPS3Q969F9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 PRELID1P1-202ENST00000567272 903 ntBASIC19.2■□□□□ 0.66
HPS3Q969F9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS3Q969F9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS3Q969F9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.2■□□□□ 0.66
HPS3Q969F9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HPS3Q969F9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.2■□□□□ 0.66
HPS3Q969F9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS3Q969F9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS3Q969F9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS3Q969F9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
HPS3Q969F9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms