Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HYMAI.1-201ENST00000620949 238 ntBASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SLC44A1Q8WWI5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 AL049757.1-201ENST00000616842 1596 ntBASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 AC117947.1-201ENST00000427448 529 ntBASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 AC122714.2-201ENST00000502787 707 ntBASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC44A1Q8WWI5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC44A1Q8WWI5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.39■□□□□ 0.38
SLC44A1Q8WWI5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.39■□□□□ 0.38
SLC44A1Q8WWI5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC44A1Q8WWI5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC44A1Q8WWI5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 AC125634.1-201ENST00000438758 1403 ntBASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 AC113347.1-201ENST00000413321 391 ntBASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC44A1Q8WWI5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms