Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAF3IP1Q8TDR0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 MINOS1P3-201ENST00000457048 203 ntBASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 AC091607.1-201ENST00000490318 1060 ntBASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 AP002414.4-201ENST00000589764 1148 ntBASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAF3IP1Q8TDR0 AC046185.3-201ENST00000623228 1824 ntBASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 AC233702.3-201ENST00000578656 1387 ntBASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAF3IP1Q8TDR0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms