Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 AL023806.1-201ENST00000603994 1649 ntBASIC18.38■□□□□ 0.53
UBA3Q8TBC4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 FAAHP1-202ENST00000446499 1238 ntBASIC18.37■□□□□ 0.53
UBA3Q8TBC4 PRYP5-201ENST00000451909 266 ntBASIC18.37■□□□□ 0.53
UBA3Q8TBC4 RNPS1P1-201ENST00000507437 918 ntBASIC18.37■□□□□ 0.53
UBA3Q8TBC4 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 AC148477.8-201ENST00000624298 468 ntBASIC18.37■□□□□ 0.53
UBA3Q8TBC4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 AC016396.2-201ENST00000562575 1417 ntBASIC18.37■□□□□ 0.53
UBA3Q8TBC4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.37■□□□□ 0.53
UBA3Q8TBC4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 AC025062.2-201ENST00000605477 670 ntBASIC18.36■□□□□ 0.53
UBA3Q8TBC4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
UBA3Q8TBC4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 RPS2P1-201ENST00000434010 821 ntBASIC18.35■□□□□ 0.53
UBA3Q8TBC4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 AP002469.2-201ENST00000531724 424 ntBASIC18.35■□□□□ 0.53
UBA3Q8TBC4 AL160237.2-201ENST00000556165 472 ntBASIC18.35■□□□□ 0.53
UBA3Q8TBC4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.35■□□□□ 0.53
UBA3Q8TBC4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms