Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 AC004870.1-201ENST00000315132 882 ntBASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 FOSL1P1-201ENST00000511041 816 ntBASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 AL591684.3-201ENST00000605187 298 ntBASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 AL121761.2-201ENST00000598007 1648 ntBASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 SPDYE21P-201ENST00000413323 827 ntBASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 KRT16P4-201ENST00000453883 522 ntBASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH19Q8TAB3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 TSPY19P-201ENST00000418461 509 ntBASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 TSPY18P-201ENST00000441642 509 ntBASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 AC132008.2-207ENST00000454517 770 ntBASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH19Q8TAB3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms