Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 KRT8P47-201ENST00000604727 1398 ntBASIC16.38■□□□□ 0.21
LPCAT4Q643R3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 AP002414.2-201ENST00000591780 3365 ntBASIC16.38■□□□□ 0.21
LPCAT4Q643R3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 KSR1P1-201ENST00000446298 240 ntBASIC16.38■□□□□ 0.21
LPCAT4Q643R3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 UNC93B5-201ENST00000530315 699 ntBASIC16.38■□□□□ 0.21
LPCAT4Q643R3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 AL109923.1-201ENST00000618799 583 ntBASIC16.38■□□□□ 0.21
LPCAT4Q643R3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
LPCAT4Q643R3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 AP002982.1-201ENST00000492365 877 ntBASIC16.37■□□□□ 0.21
LPCAT4Q643R3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 AL353708.3-201ENST00000610272 989 ntBASIC16.37■□□□□ 0.21
LPCAT4Q643R3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 AL031985.4-201ENST00000642138 673 ntBASIC16.37■□□□□ 0.21
LPCAT4Q643R3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.37■□□□□ 0.21
LPCAT4Q643R3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms