Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 NUS1P2-201ENST00000417358 873 ntBASIC20.73■□□□□ 0.91
RNF20Q5VTR2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 MIR5100-201ENST00000579544 119 ntBASIC20.73■□□□□ 0.91
RNF20Q5VTR2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 AL121761.2-201ENST00000598007 1648 ntBASIC20.73■□□□□ 0.91
RNF20Q5VTR2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF20Q5VTR2 LINC02012-201ENST00000608206 1725 ntBASIC20.73■□□□□ 0.91
RNF20Q5VTR2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 KRT16P4-201ENST00000453883 522 ntBASIC20.72■□□□□ 0.91
RNF20Q5VTR2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 AP000867.4-201ENST00000641616 219 ntBASIC20.72■□□□□ 0.91
RNF20Q5VTR2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 AL135999.2-201ENST00000622438 1686 ntBASIC20.72■□□□□ 0.91
RNF20Q5VTR2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF20Q5VTR2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 SLC25A1P3-201ENST00000395415 828 ntBASIC20.71■□□□□ 0.91
RNF20Q5VTR2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF20Q5VTR2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms