Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 EGFEM1P-202ENST00000431685 1563 ntBASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 AC060834.1-201ENST00000443027 2032 ntBASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 PRYP5-201ENST00000451909 266 ntBASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 LINC01711-201ENST00000598340 967 ntBASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 AL022326.1-202ENST00000641533 845 ntBASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN20Q4JDL3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 ACTG1P4-201ENST00000425123 1122 ntBASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 EMBP1-201ENST00000458200 901 ntBASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN20Q4JDL3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 LINC00982-205ENST00000420957 435 ntBASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPN20Q4JDL3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms