Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CDR2Q01850 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDR2Q01850 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.51■□□□□ 0.55
CDR2Q01850 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.51■□□□□ 0.55
CDR2Q01850 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDR2Q01850 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 AL135999.2-201ENST00000622438 1686 ntBASIC18.51■□□□□ 0.55
CDR2Q01850 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.51■□□□□ 0.55
CDR2Q01850 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDR2Q01850 MIR1224-201ENST00000408193 85 ntBASIC18.51■□□□□ 0.55
CDR2Q01850 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.51■□□□□ 0.55
CDR2Q01850 KLF4P1-201ENST00000412782 1185 ntBASIC18.51■□□□□ 0.55
CDR2Q01850 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.51■□□□□ 0.55
CDR2Q01850 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.51■□□□□ 0.55
CDR2Q01850 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.51■□□□□ 0.55
CDR2Q01850 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.51■□□□□ 0.55
CDR2Q01850 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDR2Q01850 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.51■□□□□ 0.55
CDR2Q01850 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.51■□□□□ 0.55
CDR2Q01850 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CDR2Q01850 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
CDR2Q01850 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.51■□□□□ 0.55
CDR2Q01850 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDR2Q01850 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.5■□□□□ 0.55
CDR2Q01850 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
CDR2Q01850 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.5■□□□□ 0.55
CDR2Q01850 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDR2Q01850 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CDR2Q01850 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.5■□□□□ 0.55
CDR2Q01850 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDR2Q01850 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.5■□□□□ 0.55
CDR2Q01850 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.5■□□□□ 0.55
CDR2Q01850 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.5■□□□□ 0.55
CDR2Q01850 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.5■□□□□ 0.55
CDR2Q01850 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.5■□□□□ 0.55
CDR2Q01850 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 PMPCAP1-201ENST00000508114 1576 ntBASIC18.5■□□□□ 0.55
CDR2Q01850 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDR2Q01850 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.5■□□□□ 0.55
CDR2Q01850 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.49■□□□□ 0.55
CDR2Q01850 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.49■□□□□ 0.55
CDR2Q01850 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDR2Q01850 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
CDR2Q01850 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDR2Q01850 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDR2Q01850 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.49■□□□□ 0.55
CDR2Q01850 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.49■□□□□ 0.55
CDR2Q01850 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.49■□□□□ 0.55
CDR2Q01850 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.49■□□□□ 0.55
CDR2Q01850 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDR2Q01850 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.49■□□□□ 0.55
CDR2Q01850 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.49■□□□□ 0.55
CDR2Q01850 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.49■□□□□ 0.55
CDR2Q01850 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.49■□□□□ 0.55
CDR2Q01850 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.49■□□□□ 0.55
CDR2Q01850 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.49■□□□□ 0.55
CDR2Q01850 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms