Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.54■□□□□ 0.24
GFERP55789 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
GFERP55789 AC092183.1-201ENST00000469884 875 ntBASIC16.54■□□□□ 0.24
GFERP55789 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.54■□□□□ 0.24
GFERP55789 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.54■□□□□ 0.24
GFERP55789 AC004877.2-201ENST00000623941 599 ntBASIC16.54■□□□□ 0.24
GFERP55789 AC134684.3-201ENST00000641758 218 ntBASIC16.54■□□□□ 0.24
GFERP55789 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.54■□□□□ 0.24
GFERP55789 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.54■□□□□ 0.24
GFERP55789 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.54■□□□□ 0.24
GFERP55789 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.54■□□□□ 0.24
GFERP55789 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GFERP55789 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GFERP55789 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
GFERP55789 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GFERP55789 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.53■□□□□ 0.24
GFERP55789 AC004967.1-201ENST00000453589 447 ntBASIC16.53■□□□□ 0.24
GFERP55789 AC096734.2-201ENST00000562054 433 ntBASIC16.53■□□□□ 0.24
GFERP55789 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GFERP55789 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.53■□□□□ 0.24
GFERP55789 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
GFERP55789 AC018470.1-201ENST00000624790 3129 ntBASIC16.53■□□□□ 0.24
GFERP55789 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.53■□□□□ 0.24
GFERP55789 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.53■□□□□ 0.24
GFERP55789 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
GFERP55789 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFERP55789 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.52■□□□□ 0.24
GFERP55789 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.52■□□□□ 0.24
GFERP55789 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
GFERP55789 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFERP55789 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFERP55789 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFERP55789 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.52■□□□□ 0.24
GFERP55789 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GFERP55789 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFERP55789 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
GFERP55789 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFERP55789 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFERP55789 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
GFERP55789 PAWRP1-201ENST00000451083 565 ntBASIC16.52■□□□□ 0.24
GFERP55789 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.52■□□□□ 0.24
GFERP55789 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.52■□□□□ 0.24
GFERP55789 KRT19P2-202ENST00000557173 1012 ntBASIC16.52■□□□□ 0.24
GFERP55789 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.52■□□□□ 0.24
GFERP55789 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.52■□□□□ 0.24
GFERP55789 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.52■□□□□ 0.24
GFERP55789 AL078644.1-201ENST00000609881 752 ntBASIC16.52■□□□□ 0.24
GFERP55789 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.52■□□□□ 0.24
GFERP55789 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFERP55789 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFERP55789 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GFERP55789 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
GFERP55789 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.52■□□□□ 0.23
GFERP55789 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.52■□□□□ 0.23
GFERP55789 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GFERP55789 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GFERP55789 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GFERP55789 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GFERP55789 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GFERP55789 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.52■□□□□ 0.23
GFERP55789 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GFERP55789 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFERP55789 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.51■□□□□ 0.23
GFERP55789 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFERP55789 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFERP55789 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFERP55789 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFERP55789 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GFERP55789 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFERP55789 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFERP55789 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.51■□□□□ 0.23
GFERP55789 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.51■□□□□ 0.23
GFERP55789 RHOQP3-201ENST00000437982 621 ntBASIC16.51■□□□□ 0.23
GFERP55789 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.51■□□□□ 0.23
GFERP55789 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.51■□□□□ 0.23
GFERP55789 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.51■□□□□ 0.23
GFERP55789 PDPK2P-202ENST00000562415 1191 ntBASIC16.51■□□□□ 0.23
GFERP55789 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.51■□□□□ 0.23
GFERP55789 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms