Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.51■□□□□ 0.23
NR1H2P55055 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.51■□□□□ 0.23
NR1H2P55055 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.51■□□□□ 0.23
NR1H2P55055 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.51■□□□□ 0.23
NR1H2P55055 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
NR1H2P55055 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NR1H2P55055 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NR1H2P55055 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.5■□□□□ 0.23
NR1H2P55055 AC060834.1-201ENST00000443027 2032 ntBASIC16.5■□□□□ 0.23
NR1H2P55055 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.5■□□□□ 0.23
NR1H2P55055 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.5■□□□□ 0.23
NR1H2P55055 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
NR1H2P55055 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
NR1H2P55055 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.5■□□□□ 0.23
NR1H2P55055 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.5■□□□□ 0.23
NR1H2P55055 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.5■□□□□ 0.23
NR1H2P55055 AC023824.1-201ENST00000562945 2975 ntBASIC16.5■□□□□ 0.23
NR1H2P55055 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.5■□□□□ 0.23
NR1H2P55055 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.5■□□□□ 0.23
NR1H2P55055 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NR1H2P55055 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.5■□□□□ 0.23
NR1H2P55055 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.5■□□□□ 0.23
NR1H2P55055 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NR1H2P55055 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H2P55055 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
NR1H2P55055 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NR1H2P55055 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H2P55055 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.49■□□□□ 0.23
NR1H2P55055 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.49■□□□□ 0.23
NR1H2P55055 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NR1H2P55055 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.49■□□□□ 0.23
NR1H2P55055 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.49■□□□□ 0.23
NR1H2P55055 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H2P55055 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.49■□□□□ 0.23
NR1H2P55055 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.49■□□□□ 0.23
NR1H2P55055 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.49■□□□□ 0.23
NR1H2P55055 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.49■□□□□ 0.23
NR1H2P55055 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.49■□□□□ 0.23
NR1H2P55055 NEK4P2-201ENST00000580004 1012 ntBASIC16.49■□□□□ 0.23
NR1H2P55055 AC011558.1-201ENST00000623459 338 ntBASIC16.49■□□□□ 0.23
NR1H2P55055 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms