Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
PMS1P54277 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PMS1P54277 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PMS1P54277 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PMS1P54277 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.08■□□□□ 0.65
PMS1P54277 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PMS1P54277 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.08■□□□□ 0.65
PMS1P54277 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.08■□□□□ 0.65
PMS1P54277 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.08■□□□□ 0.65
PMS1P54277 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PMS1P54277 PMPCAP1-201ENST00000508114 1576 ntBASIC19.08■□□□□ 0.65
PMS1P54277 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PMS1P54277 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PMS1P54277 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.08■□□□□ 0.64
PMS1P54277 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.08■□□□□ 0.64
PMS1P54277 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PMS1P54277 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.64
PMS1P54277 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PMS1P54277 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.07■□□□□ 0.64
PMS1P54277 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
PMS1P54277 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PMS1P54277 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.07■□□□□ 0.64
PMS1P54277 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PMS1P54277 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.07■□□□□ 0.64
PMS1P54277 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.07■□□□□ 0.64
PMS1P54277 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.07■□□□□ 0.64
PMS1P54277 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.07■□□□□ 0.64
PMS1P54277 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.07■□□□□ 0.64
PMS1P54277 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.07■□□□□ 0.64
PMS1P54277 AC092119.3-201ENST00000612618 583 ntBASIC19.07■□□□□ 0.64
PMS1P54277 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PMS1P54277 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
PMS1P54277 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PMS1P54277 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.07■□□□□ 0.64
PMS1P54277 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PMS1P54277 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PMS1P54277 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 AC078925.2-201ENST00000624013 1973 ntBASIC19.06■□□□□ 0.64
PMS1P54277 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PMS1P54277 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.06■□□□□ 0.64
PMS1P54277 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 AC092171.3-201ENST00000610122 2651 ntBASIC19.06■□□□□ 0.64
PMS1P54277 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 PCDHA14-201ENST00000506751 2298 ntBASIC19.06■□□□□ 0.64
PMS1P54277 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.06■□□□□ 0.64
PMS1P54277 AC003669.1-201ENST00000334569 611 ntBASIC19.06■□□□□ 0.64
PMS1P54277 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms