Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLTCL1P53675 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC24.53■■□□□ 1.52
CLTCL1P53675 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC24.53■■□□□ 1.52
CLTCL1P53675 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CLTCL1P53675 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC24.53■■□□□ 1.52
CLTCL1P53675 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC24.53■■□□□ 1.52
CLTCL1P53675 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC24.53■■□□□ 1.52
CLTCL1P53675 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CLTCL1P53675 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC24.53■■□□□ 1.52
CLTCL1P53675 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CLTCL1P53675 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC24.53■■□□□ 1.52
CLTCL1P53675 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC24.53■■□□□ 1.52
CLTCL1P53675 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC24.53■■□□□ 1.52
CLTCL1P53675 MTRF1LP2-201ENST00000506027 1122 ntBASIC24.53■■□□□ 1.52
CLTCL1P53675 AC084121.4-201ENST00000641598 221 ntBASIC24.53■■□□□ 1.52
CLTCL1P53675 AF228730.8-201ENST00000642140 221 ntBASIC24.53■■□□□ 1.52
CLTCL1P53675 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CLTCL1P53675 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLTCL1P53675 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLTCL1P53675 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC24.52■■□□□ 1.52
CLTCL1P53675 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CLTCL1P53675 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
CLTCL1P53675 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC24.52■■□□□ 1.52
CLTCL1P53675 AC012569.1-201ENST00000591191 1524 ntBASIC24.52■■□□□ 1.52
CLTCL1P53675 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLTCL1P53675 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC24.52■■□□□ 1.52
CLTCL1P53675 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLTCL1P53675 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLTCL1P53675 CD99-202ENST00000381180 530 ntTSL 2 BASIC24.52■■□□□ 1.52
CLTCL1P53675 HCG4-201ENST00000418983 998 ntBASIC24.52■■□□□ 1.52
CLTCL1P53675 AL671277.1-201ENST00000429656 993 ntBASIC24.52■■□□□ 1.52
CLTCL1P53675 AC067863.1-201ENST00000494933 530 ntBASIC24.52■■□□□ 1.52
CLTCL1P53675 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC24.52■■□□□ 1.52
CLTCL1P53675 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLTCL1P53675 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLTCL1P53675 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLTCL1P53675 HARS-204ENST00000438307 1789 ntTSL 2 BASIC24.52■■□□□ 1.52
CLTCL1P53675 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
CLTCL1P53675 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CLTCL1P53675 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC24.52■■□□□ 1.52
CLTCL1P53675 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLTCL1P53675 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CLTCL1P53675 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CLTCL1P53675 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC24.51■■□□□ 1.51
CLTCL1P53675 WRB-204ENST00000398753 699 ntTSL 3 BASIC24.51■■□□□ 1.51
CLTCL1P53675 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC24.51■■□□□ 1.51
CLTCL1P53675 CNN2P2-201ENST00000443536 909 ntBASIC24.51■■□□□ 1.51
CLTCL1P53675 CNN2P3-201ENST00000450201 906 ntBASIC24.51■■□□□ 1.51
CLTCL1P53675 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC24.51■■□□□ 1.51
CLTCL1P53675 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLTCL1P53675 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLTCL1P53675 AL136317.3-201ENST00000618497 906 ntBASIC24.51■■□□□ 1.51
CLTCL1P53675 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC24.51■■□□□ 1.51
CLTCL1P53675 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLTCL1P53675 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC24.51■■□□□ 1.51
CLTCL1P53675 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CLTCL1P53675 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLTCL1P53675 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CLTCL1P53675 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLTCL1P53675 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC24.5■■□□□ 1.51
CLTCL1P53675 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC24.5■■□□□ 1.51
CLTCL1P53675 AC093214.1-201ENST00000511688 1107 ntBASIC24.5■■□□□ 1.51
CLTCL1P53675 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC24.5■■□□□ 1.51
CLTCL1P53675 AC025678.2-201ENST00000562061 970 ntBASIC24.5■■□□□ 1.51
CLTCL1P53675 AC091167.2-201ENST00000579581 588 ntBASIC24.5■■□□□ 1.51
CLTCL1P53675 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CLTCL1P53675 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC24.5■■□□□ 1.51
CLTCL1P53675 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CLTCL1P53675 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 WASH6P-202ENST00000359512 1437 ntBASIC24.5■■□□□ 1.51
CLTCL1P53675 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC24.5■■□□□ 1.51
CLTCL1P53675 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.5■■□□□ 1.51
CLTCL1P53675 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CLTCL1P53675 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC24.5■■□□□ 1.51
CLTCL1P53675 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
CLTCL1P53675 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CLTCL1P53675 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms