Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.42■□□□□ 0.22
KNTC1P50748 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KNTC1P50748 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.42■□□□□ 0.22
KNTC1P50748 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 AC116407.2-201ENST00000613639 860 ntBASIC16.42■□□□□ 0.22
KNTC1P50748 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
KNTC1P50748 AC093677.2-201ENST00000600169 1863 ntBASIC16.42■□□□□ 0.22
KNTC1P50748 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.42■□□□□ 0.22
KNTC1P50748 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KNTC1P50748 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
KNTC1P50748 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
KNTC1P50748 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KNTC1P50748 PTCHD3P3-201ENST00000403073 906 ntBASIC16.42■□□□□ 0.22
KNTC1P50748 INGX-202ENST00000489074 768 ntBASIC16.42■□□□□ 0.22
KNTC1P50748 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.42■□□□□ 0.22
KNTC1P50748 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.42■□□□□ 0.22
KNTC1P50748 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KNTC1P50748 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KNTC1P50748 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.42■□□□□ 0.22
KNTC1P50748 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.42■□□□□ 0.22
KNTC1P50748 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.41■□□□□ 0.22
KNTC1P50748 AC005237.2-201ENST00000434368 219 ntBASIC16.41■□□□□ 0.22
KNTC1P50748 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.41■□□□□ 0.22
KNTC1P50748 LINC01225-203ENST00000563550 1244 ntBASIC16.41■□□□□ 0.22
KNTC1P50748 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 AL031598.1-201ENST00000561511 1773 ntBASIC16.41■□□□□ 0.22
KNTC1P50748 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KNTC1P50748 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KNTC1P50748 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KNTC1P50748 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.41■□□□□ 0.22
KNTC1P50748 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
KNTC1P50748 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 AC007274.1-201ENST00000439805 662 ntBASIC16.41■□□□□ 0.22
KNTC1P50748 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.41■□□□□ 0.22
KNTC1P50748 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KNTC1P50748 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KNTC1P50748 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
KNTC1P50748 CROCCP3-202ENST00000420820 1947 ntBASIC16.4■□□□□ 0.22
KNTC1P50748 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
KNTC1P50748 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KNTC1P50748 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
KNTC1P50748 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.4■□□□□ 0.22
KNTC1P50748 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KNTC1P50748 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 AL671277.1-201ENST00000429656 993 ntBASIC16.4■□□□□ 0.22
KNTC1P50748 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 AC025048.6-201ENST00000634326 1161 ntBASIC16.4■□□□□ 0.22
KNTC1P50748 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.4■□□□□ 0.22
KNTC1P50748 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KNTC1P50748 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KNTC1P50748 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms