Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AKAP8P1-201ENST00000434743 1349 ntBASIC19.36■□□□□ 0.69
CENPFP49454 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPFP49454 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPFP49454 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CENPFP49454 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPFP49454 AC119751.2-201ENST00000504529 210 ntBASIC19.36■□□□□ 0.69
CENPFP49454 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CENPFP49454 AC093677.2-201ENST00000600169 1863 ntBASIC19.36■□□□□ 0.69
CENPFP49454 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPFP49454 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPFP49454 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CENPFP49454 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.36■□□□□ 0.69
CENPFP49454 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CENPFP49454 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.36■□□□□ 0.69
CENPFP49454 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.36■□□□□ 0.69
CENPFP49454 AL135999.2-201ENST00000622438 1686 ntBASIC19.36■□□□□ 0.69
CENPFP49454 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CENPFP49454 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CENPFP49454 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.35■□□□□ 0.69
CENPFP49454 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CENPFP49454 AC087289.5-201ENST00000586076 3175 ntBASIC19.35■□□□□ 0.69
CENPFP49454 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.35■□□□□ 0.69
CENPFP49454 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CENPFP49454 KRT17P8-201ENST00000540749 863 ntBASIC19.35■□□□□ 0.69
CENPFP49454 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.35■□□□□ 0.69
CENPFP49454 KRT8P23-201ENST00000560090 1207 ntBASIC19.35■□□□□ 0.69
CENPFP49454 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CENPFP49454 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 AL020996.1-203ENST00000536896 2307 ntBASIC19.35■□□□□ 0.69
CENPFP49454 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CENPFP49454 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPFP49454 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.35■□□□□ 0.69
CENPFP49454 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPFP49454 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.35■□□□□ 0.69
CENPFP49454 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPFP49454 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.35■□□□□ 0.69
CENPFP49454 RARRES2P8-201ENST00000566335 367 ntBASIC19.35■□□□□ 0.69
CENPFP49454 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPFP49454 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CENPFP49454 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.34■□□□□ 0.69
CENPFP49454 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 TMEM14DP-201ENST00000422205 345 ntBASIC19.34■□□□□ 0.69
CENPFP49454 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.34■□□□□ 0.69
CENPFP49454 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CENPFP49454 MIR6080-201ENST00000617359 66 ntBASIC19.34■□□□□ 0.69
CENPFP49454 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CENPFP49454 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CENPFP49454 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CENPFP49454 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.34■□□□□ 0.69
CENPFP49454 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 GPR182-203ENST00000622922 591 ntBASIC19.34■□□□□ 0.69
CENPFP49454 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.34■□□□□ 0.69
CENPFP49454 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CENPFP49454 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.34■□□□□ 0.69
CENPFP49454 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CENPFP49454 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CENPFP49454 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CENPFP49454 AL031598.1-201ENST00000561511 1773 ntBASIC19.33■□□□□ 0.69
CENPFP49454 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.33■□□□□ 0.69
CENPFP49454 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CENPFP49454 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.33■□□□□ 0.69
CENPFP49454 AC087163.2-201ENST00000457299 853 ntBASIC19.33■□□□□ 0.69
CENPFP49454 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.33■□□□□ 0.69
CENPFP49454 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.33■□□□□ 0.69
CENPFP49454 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.33■□□□□ 0.69
CENPFP49454 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CENPFP49454 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CENPFP49454 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
CENPFP49454 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.33■□□□□ 0.68
CENPFP49454 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CENPFP49454 IGHV3-42-201ENST00000520410 361 ntBASIC19.33■□□□□ 0.68
CENPFP49454 AC106886.1-201ENST00000568660 600 ntBASIC19.33■□□□□ 0.68
CENPFP49454 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CENPFP49454 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CENPFP49454 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
CENPFP49454 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CENPFP49454 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CENPFP49454 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CENPFP49454 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPFP49454 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.32■□□□□ 0.68
CENPFP49454 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.32■□□□□ 0.68
CENPFP49454 MIR6787-201ENST00000616675 61 ntBASIC19.32■□□□□ 0.68
CENPFP49454 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.32■□□□□ 0.68
CENPFP49454 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms