Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.77■□□□□ 0.76
COPB2P35606 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
COPB2P35606 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.77■□□□□ 0.76
COPB2P35606 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
COPB2P35606 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.77■□□□□ 0.76
COPB2P35606 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.77■□□□□ 0.76
COPB2P35606 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.77■□□□□ 0.76
COPB2P35606 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
COPB2P35606 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPB2P35606 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COPB2P35606 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
COPB2P35606 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.76■□□□□ 0.75
COPB2P35606 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 PCDHB18P-201ENST00000524813 2368 ntBASIC19.76■□□□□ 0.75
COPB2P35606 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.76■□□□□ 0.75
COPB2P35606 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.76■□□□□ 0.75
COPB2P35606 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.76■□□□□ 0.75
COPB2P35606 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
COPB2P35606 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
COPB2P35606 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.76■□□□□ 0.75
COPB2P35606 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.76■□□□□ 0.75
COPB2P35606 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COPB2P35606 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.76■□□□□ 0.75
COPB2P35606 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 AC091812.2-201ENST00000619081 385 ntBASIC19.76■□□□□ 0.75
COPB2P35606 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.76■□□□□ 0.75
COPB2P35606 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.76■□□□□ 0.75
COPB2P35606 AC138028.4-201ENST00000564984 1845 ntBASIC19.76■□□□□ 0.75
COPB2P35606 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPB2P35606 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.76■□□□□ 0.75
COPB2P35606 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
COPB2P35606 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.76■□□□□ 0.75
COPB2P35606 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.76■□□□□ 0.75
COPB2P35606 AC129492.6-201ENST00000611383 1305 ntBASIC19.76■□□□□ 0.75
COPB2P35606 AC138932.1-201ENST00000534164 6830 ntBASIC19.75■□□□□ 0.75
COPB2P35606 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COPB2P35606 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.75■□□□□ 0.75
COPB2P35606 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
COPB2P35606 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.75■□□□□ 0.75
COPB2P35606 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
COPB2P35606 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.75■□□□□ 0.75
COPB2P35606 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 RFPL4AP1-201ENST00000530883 850 ntBASIC19.75■□□□□ 0.75
COPB2P35606 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COPB2P35606 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.75■□□□□ 0.75
COPB2P35606 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
COPB2P35606 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COPB2P35606 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.75■□□□□ 0.75
COPB2P35606 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.75■□□□□ 0.75
COPB2P35606 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.75■□□□□ 0.75
COPB2P35606 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.75■□□□□ 0.75
COPB2P35606 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPB2P35606 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.74■□□□□ 0.75
COPB2P35606 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms