Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.89■□□□□ 0.94
ATP2B4P23634 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
ATP2B4P23634 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B4P23634 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B4P23634 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B4P23634 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B4P23634 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B4P23634 TFAMP1-201ENST00000412727 736 ntBASIC20.89■□□□□ 0.93
ATP2B4P23634 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B4P23634 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B4P23634 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.89■□□□□ 0.93
ATP2B4P23634 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP2B4P23634 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP2B4P23634 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B4P23634 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP2B4P23634 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
ATP2B4P23634 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2B4P23634 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ATP2B4P23634 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2B4P23634 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATP2B4P23634 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B4P23634 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B4P23634 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B4P23634 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2B4P23634 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 HMGA1P7-201ENST00000406908 502 ntBASIC20.88■□□□□ 0.93
ATP2B4P23634 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.88■□□□□ 0.93
ATP2B4P23634 AC005237.2-201ENST00000434368 219 ntBASIC20.88■□□□□ 0.93
ATP2B4P23634 AL592309.1-201ENST00000443127 649 ntBASIC20.88■□□□□ 0.93
ATP2B4P23634 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.88■□□□□ 0.93
ATP2B4P23634 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.88■□□□□ 0.93
ATP2B4P23634 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2B4P23634 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2B4P23634 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2B4P23634 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.88■□□□□ 0.93
ATP2B4P23634 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2B4P23634 AL096865.1-201ENST00000606796 927 ntBASIC20.88■□□□□ 0.93
ATP2B4P23634 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B4P23634 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATP2B4P23634 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2B4P23634 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2B4P23634 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2B4P23634 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2B4P23634 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2B4P23634 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2B4P23634 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B4P23634 SLC25A6P5-201ENST00000435663 894 ntBASIC20.87■□□□□ 0.93
ATP2B4P23634 BCRP1-201ENST00000444246 691 ntBASIC20.87■□□□□ 0.93
ATP2B4P23634 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.87■□□□□ 0.93
ATP2B4P23634 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B4P23634 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.87■□□□□ 0.93
ATP2B4P23634 AC005412.3-201ENST00000580309 715 ntBASIC20.87■□□□□ 0.93
ATP2B4P23634 AC015911.4-201ENST00000588022 1070 ntBASIC20.87■□□□□ 0.93
ATP2B4P23634 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2B4P23634 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2B4P23634 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2B4P23634 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2B4P23634 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2B4P23634 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2B4P23634 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2B4P23634 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ATP2B4P23634 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
ATP2B4P23634 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP2B4P23634 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 FAM86GP-201ENST00000448322 971 ntBASIC20.86■□□□□ 0.93
ATP2B4P23634 RN7SL589P-201ENST00000481268 310 ntBASIC20.86■□□□□ 0.93
ATP2B4P23634 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2B4P23634 AC079140.1-201ENST00000508039 487 ntBASIC20.86■□□□□ 0.93
ATP2B4P23634 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 AC243562.1-201ENST00000560672 389 ntBASIC20.86■□□□□ 0.93
ATP2B4P23634 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2B4P23634 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2B4P23634 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2B4P23634 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2B4P23634 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2B4P23634 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2B4P23634 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms