Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFSF4P23510 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 AC073648.2-201ENST00000510116 352 ntBASIC14.88□□□□□ -0.03
TNFSF4P23510 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.88□□□□□ -0.03
TNFSF4P23510 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TNFSF4P23510 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TNFSF4P23510 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.88□□□□□ -0.03
TNFSF4P23510 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TNFSF4P23510 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 AC018470.1-201ENST00000624790 3129 ntBASIC14.88□□□□□ -0.03
TNFSF4P23510 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TNFSF4P23510 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFSF4P23510 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFSF4P23510 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFSF4P23510 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.87□□□□□ -0.03
TNFSF4P23510 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFSF4P23510 STK25P1-201ENST00000585406 838 ntBASIC14.87□□□□□ -0.03
TNFSF4P23510 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFSF4P23510 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.87□□□□□ -0.03
TNFSF4P23510 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFSF4P23510 NOC2LP2-201ENST00000407594 1944 ntBASIC14.87□□□□□ -0.03
TNFSF4P23510 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFSF4P23510 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.87□□□□□ -0.03
TNFSF4P23510 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TNFSF4P23510 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
TNFSF4P23510 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.87□□□□□ -0.03
TNFSF4P23510 LINC00304-203ENST00000565008 1864 ntBASIC14.86□□□□□ -0.03
TNFSF4P23510 AC134043.2-201ENST00000624206 2238 ntBASIC14.86□□□□□ -0.03
TNFSF4P23510 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFSF4P23510 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 REXO1L11P-201ENST00000620964 1927 ntBASIC14.86□□□□□ -0.03
TNFSF4P23510 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TNFSF4P23510 AC079776.2-201ENST00000641154 1609 ntBASIC14.86□□□□□ -0.03
TNFSF4P23510 AKR1C7P-201ENST00000305623 895 ntBASIC14.86□□□□□ -0.03
TNFSF4P23510 RPS2P28-201ENST00000314255 741 ntBASIC14.86□□□□□ -0.03
TNFSF4P23510 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 AF186996.4-201ENST00000467186 377 ntBASIC14.86□□□□□ -0.03
TNFSF4P23510 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.86□□□□□ -0.03
TNFSF4P23510 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFSF4P23510 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.86□□□□□ -0.03
TNFSF4P23510 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFSF4P23510 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFSF4P23510 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFSF4P23510 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFSF4P23510 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TNFSF4P23510 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.86□□□□□ -0.03
TNFSF4P23510 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFSF4P23510 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TNFSF4P23510 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TNFSF4P23510 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.86□□□□□ -0.03
TNFSF4P23510 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFSF4P23510 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFSF4P23510 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TNFSF4P23510 AL133373.2-201ENST00000623187 2828 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms