Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.21■□□□□ 0.35
NELFEP18615 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.21■□□□□ 0.35
NELFEP18615 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NELFEP18615 AC125634.1-201ENST00000438758 1403 ntBASIC17.21■□□□□ 0.34
NELFEP18615 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NELFEP18615 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.2■□□□□ 0.34
NELFEP18615 AL118508.1-201ENST00000613502 2345 ntBASIC17.2■□□□□ 0.34
NELFEP18615 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.2■□□□□ 0.34
NELFEP18615 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.2■□□□□ 0.34
NELFEP18615 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.2■□□□□ 0.34
NELFEP18615 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.2■□□□□ 0.34
NELFEP18615 AC112698.1-201ENST00000510299 916 ntBASIC17.2■□□□□ 0.34
NELFEP18615 AC106795.1-205ENST00000512851 1056 ntBASIC17.2■□□□□ 0.34
NELFEP18615 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.2■□□□□ 0.34
NELFEP18615 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.2■□□□□ 0.34
NELFEP18615 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.2■□□□□ 0.34
NELFEP18615 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.2■□□□□ 0.34
NELFEP18615 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.2■□□□□ 0.34
NELFEP18615 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NELFEP18615 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.2■□□□□ 0.34
NELFEP18615 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NELFEP18615 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NELFEP18615 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 AL662844.1-201ENST00000546340 181 ntBASIC17.19■□□□□ 0.34
NELFEP18615 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
NELFEP18615 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.19■□□□□ 0.34
NELFEP18615 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.19■□□□□ 0.34
NELFEP18615 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.19■□□□□ 0.34
NELFEP18615 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.19■□□□□ 0.34
NELFEP18615 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NELFEP18615 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NELFEP18615 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NELFEP18615 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
NELFEP18615 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NELFEP18615 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NELFEP18615 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NELFEP18615 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NELFEP18615 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NELFEP18615 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NELFEP18615 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NELFEP18615 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms