Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.17■□□□□ 0.34
COL6A2P12110 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
COL6A2P12110 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
COL6A2P12110 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.17■□□□□ 0.34
COL6A2P12110 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.17■□□□□ 0.34
COL6A2P12110 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.17■□□□□ 0.34
COL6A2P12110 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.17■□□□□ 0.34
COL6A2P12110 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.17■□□□□ 0.34
COL6A2P12110 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
COL6A2P12110 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.17■□□□□ 0.34
COL6A2P12110 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.17■□□□□ 0.34
COL6A2P12110 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.17■□□□□ 0.34
COL6A2P12110 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.17■□□□□ 0.34
COL6A2P12110 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.17■□□□□ 0.34
COL6A2P12110 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.17■□□□□ 0.34
COL6A2P12110 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.17■□□□□ 0.34
COL6A2P12110 AC090616.6-201ENST00000582640 721 ntBASIC17.17■□□□□ 0.34
COL6A2P12110 AC083849.1-201ENST00000615227 514 ntBASIC17.17■□□□□ 0.34
COL6A2P12110 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.17■□□□□ 0.34
COL6A2P12110 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COL6A2P12110 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COL6A2P12110 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.17■□□□□ 0.34
COL6A2P12110 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL6A2P12110 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.16■□□□□ 0.34
COL6A2P12110 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
COL6A2P12110 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COL6A2P12110 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 EGFEM1P-202ENST00000431685 1563 ntBASIC17.16■□□□□ 0.34
COL6A2P12110 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COL6A2P12110 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.16■□□□□ 0.34
COL6A2P12110 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
COL6A2P12110 AC063952.2-201ENST00000498792 1227 ntBASIC17.16■□□□□ 0.34
COL6A2P12110 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.16■□□□□ 0.34
COL6A2P12110 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.16■□□□□ 0.34
COL6A2P12110 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.16■□□□□ 0.34
COL6A2P12110 FLJ38576-201ENST00000623820 2459 ntBASIC17.16■□□□□ 0.34
COL6A2P12110 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COL6A2P12110 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.16■□□□□ 0.34
COL6A2P12110 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.16■□□□□ 0.34
COL6A2P12110 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL6A2P12110 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.16■□□□□ 0.34
COL6A2P12110 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL6A2P12110 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
COL6A2P12110 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.15■□□□□ 0.34
COL6A2P12110 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
COL6A2P12110 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 KRT8P10-201ENST00000450021 1447 ntBASIC17.15■□□□□ 0.34
COL6A2P12110 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL6A2P12110 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL6A2P12110 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.15■□□□□ 0.34
COL6A2P12110 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.15■□□□□ 0.34
COL6A2P12110 AL645929.1-201ENST00000420084 975 ntBASIC17.15■□□□□ 0.34
COL6A2P12110 TSPY22P-201ENST00000427496 604 ntBASIC17.15■□□□□ 0.34
COL6A2P12110 KRT18P57-201ENST00000443599 1254 ntBASIC17.15■□□□□ 0.34
COL6A2P12110 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.15■□□□□ 0.34
COL6A2P12110 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.15■□□□□ 0.34
COL6A2P12110 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.15■□□□□ 0.34
COL6A2P12110 AC011840.4-201ENST00000578471 627 ntBASIC17.15■□□□□ 0.34
COL6A2P12110 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL6A2P12110 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.15■□□□□ 0.34
COL6A2P12110 AL592071.1-201ENST00000611956 408 ntBASIC17.15■□□□□ 0.34
COL6A2P12110 AC124864.1-201ENST00000623408 392 ntBASIC17.15■□□□□ 0.34
COL6A2P12110 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.15■□□□□ 0.34
COL6A2P12110 AL353593.2-201ENST00000602529 1483 ntBASIC17.15■□□□□ 0.34
COL6A2P12110 PCDHA14-201ENST00000506751 2298 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms