Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 AL627223.1-201ENST00000416693 442 ntBASIC19.35■□□□□ 0.69
RARBP10826 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.35■□□□□ 0.69
RARBP10826 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.35■□□□□ 0.69
RARBP10826 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.35■□□□□ 0.69
RARBP10826 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.35■□□□□ 0.69
RARBP10826 FAM86C2P-203ENST00000528684 1004 ntBASIC19.35■□□□□ 0.69
RARBP10826 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.35■□□□□ 0.69
RARBP10826 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.35■□□□□ 0.69
RARBP10826 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RARBP10826 AC026120.1-201ENST00000611536 926 ntBASIC19.35■□□□□ 0.69
RARBP10826 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.35■□□□□ 0.69
RARBP10826 AC009093.7-201ENST00000623853 1223 ntBASIC19.35■□□□□ 0.69
RARBP10826 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.35■□□□□ 0.69
RARBP10826 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.35■□□□□ 0.69
RARBP10826 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.35■□□□□ 0.69
RARBP10826 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RARBP10826 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RARBP10826 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RARBP10826 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RARBP10826 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.35■□□□□ 0.69
RARBP10826 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
RARBP10826 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RARBP10826 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RARBP10826 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RARBP10826 AC129492.6-201ENST00000611383 1305 ntBASIC19.34■□□□□ 0.69
RARBP10826 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.34■□□□□ 0.69
RARBP10826 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.34■□□□□ 0.69
RARBP10826 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.34■□□□□ 0.69
RARBP10826 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.34■□□□□ 0.69
RARBP10826 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.34■□□□□ 0.69
RARBP10826 AC138761.1-201ENST00000584393 385 ntBASIC19.34■□□□□ 0.69
RARBP10826 AC015911.4-201ENST00000588022 1070 ntBASIC19.34■□□□□ 0.69
RARBP10826 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.34■□□□□ 0.69
RARBP10826 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.34■□□□□ 0.69
RARBP10826 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RARBP10826 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RARBP10826 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RARBP10826 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARBP10826 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RARBP10826 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RARBP10826 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RARBP10826 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.33■□□□□ 0.69
RARBP10826 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
RARBP10826 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RARBP10826 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RARBP10826 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RARBP10826 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.33■□□□□ 0.69
RARBP10826 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RARBP10826 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
RARBP10826 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RARBP10826 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RARBP10826 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RARBP10826 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RARBP10826 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RARBP10826 AL355306.1-201ENST00000415580 579 ntBASIC19.33■□□□□ 0.68
RARBP10826 AL671277.1-201ENST00000429656 993 ntBASIC19.33■□□□□ 0.68
RARBP10826 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.33■□□□□ 0.68
RARBP10826 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.33■□□□□ 0.68
RARBP10826 AC244107.1-201ENST00000442033 332 ntBASIC19.33■□□□□ 0.68
RARBP10826 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.33■□□□□ 0.68
RARBP10826 RNA5SP421-201ENST00000516864 134 ntBASIC19.33■□□□□ 0.68
RARBP10826 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.33■□□□□ 0.68
RARBP10826 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.33■□□□□ 0.68
RARBP10826 AC093520.2-201ENST00000561830 333 ntBASIC19.33■□□□□ 0.68
RARBP10826 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.33■□□□□ 0.68
RARBP10826 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.33■□□□□ 0.68
RARBP10826 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RARBP10826 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RARBP10826 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms