Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VTNP04004 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.96■□□□□ 0.63
VTNP04004 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VTNP04004 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VTNP04004 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VTNP04004 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.96■□□□□ 0.63
VTNP04004 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.96■□□□□ 0.63
VTNP04004 KRT19P2-202ENST00000557173 1012 ntBASIC18.96■□□□□ 0.63
VTNP04004 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.96■□□□□ 0.63
VTNP04004 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 AC005829.1-201ENST00000570002 483 ntBASIC18.96■□□□□ 0.63
VTNP04004 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
VTNP04004 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.96■□□□□ 0.63
VTNP04004 AP001160.2-201ENST00000596071 487 ntBASIC18.96■□□□□ 0.63
VTNP04004 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VTNP04004 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 RNF165-205ENST00000588679 2904 ntBASIC18.96■□□□□ 0.63
VTNP04004 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VTNP04004 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.95■□□□□ 0.62
VTNP04004 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VTNP04004 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
VTNP04004 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VTNP04004 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
VTNP04004 AC025580.3-201ENST00000617932 1424 ntBASIC18.95■□□□□ 0.62
VTNP04004 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 AC211486.1-202ENST00000416371 468 ntBASIC18.95■□□□□ 0.62
VTNP04004 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.95■□□□□ 0.62
VTNP04004 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.95■□□□□ 0.62
VTNP04004 RHOQP3-201ENST00000437982 621 ntBASIC18.95■□□□□ 0.62
VTNP04004 PAWRP1-201ENST00000451083 565 ntBASIC18.95■□□□□ 0.62
VTNP04004 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.95■□□□□ 0.62
VTNP04004 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.95■□□□□ 0.62
VTNP04004 AC211476.1-201ENST00000503899 468 ntBASIC18.95■□□□□ 0.62
VTNP04004 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.95■□□□□ 0.62
VTNP04004 PDPK2P-202ENST00000562415 1191 ntBASIC18.95■□□□□ 0.62
VTNP04004 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.95■□□□□ 0.62
VTNP04004 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.95■□□□□ 0.62
VTNP04004 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VTNP04004 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VTNP04004 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VTNP04004 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.94■□□□□ 0.62
VTNP04004 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTNP04004 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTNP04004 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VTNP04004 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTNP04004 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTNP04004 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VTNP04004 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VTNP04004 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.94■□□□□ 0.62
VTNP04004 CXCL1P1-201ENST00000502804 216 ntBASIC18.94■□□□□ 0.62
VTNP04004 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
VTNP04004 MIR4469-201ENST00000583919 79 ntBASIC18.94■□□□□ 0.62
VTNP04004 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
VTNP04004 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.94■□□□□ 0.62
VTNP04004 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.94■□□□□ 0.62
VTNP04004 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.94■□□□□ 0.62
VTNP04004 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
VTNP04004 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.94■□□□□ 0.62
VTNP04004 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VTNP04004 AC018470.1-201ENST00000624790 3129 ntBASIC18.94■□□□□ 0.62
VTNP04004 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
VTNP04004 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VTNP04004 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VTNP04004 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTNP04004 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.93■□□□□ 0.62
VTNP04004 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.93■□□□□ 0.62
VTNP04004 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
VTNP04004 DNAJB3-202ENST00000449667 1266 ntBASIC18.93■□□□□ 0.62
VTNP04004 SLC25A6P2-201ENST00000497974 877 ntBASIC18.93■□□□□ 0.62
VTNP04004 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.93■□□□□ 0.62
VTNP04004 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.93■□□□□ 0.62
VTNP04004 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.93■□□□□ 0.62
VTNP04004 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.93■□□□□ 0.62
VTNP04004 C20orf181-201ENST00000623918 480 ntBASIC18.93■□□□□ 0.62
VTNP04004 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms