Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV12-3P01733 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV12-3P01733 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRBV12-3P01733 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV12-3P01733 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV12-3P01733 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV12-3P01733 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV12-3P01733 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 AC108860.2-201ENST00000562760 2183 ntBASIC13.42□□□□□ -0.26
TRBV12-3P01733 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 SIGLEC30P-201ENST00000455569 941 ntBASIC13.42□□□□□ -0.26
TRBV12-3P01733 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV12-3P01733 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRBV12-3P01733 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.41□□□□□ -0.26
TRBV12-3P01733 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.41□□□□□ -0.26
TRBV12-3P01733 FAAHP1-202ENST00000446499 1238 ntBASIC13.41□□□□□ -0.26
TRBV12-3P01733 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 AC021087.4-201ENST00000563761 564 ntBASIC13.41□□□□□ -0.26
TRBV12-3P01733 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 AL022326.1-202ENST00000641533 845 ntBASIC13.41□□□□□ -0.26
TRBV12-3P01733 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV12-3P01733 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV12-3P01733 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV12-3P01733 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV12-3P01733 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV12-3P01733 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV12-3P01733 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms