Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.29■□□□□ 0.36
PDGFBP01127 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.28■□□□□ 0.36
PDGFBP01127 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PDGFBP01127 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDGFBP01127 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.28■□□□□ 0.36
PDGFBP01127 MIR658-201ENST00000385210 100 ntBASIC17.28■□□□□ 0.36
PDGFBP01127 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.28■□□□□ 0.36
PDGFBP01127 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.28■□□□□ 0.36
PDGFBP01127 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.28■□□□□ 0.36
PDGFBP01127 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 API5-211ENST00000534695 560 ntTSL 5 BASIC17.28■□□□□ 0.36
PDGFBP01127 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 AC007541.1-201ENST00000570282 1469 ntBASIC17.28■□□□□ 0.36
PDGFBP01127 AC073130.3-201ENST00000624389 2278 ntBASIC17.28■□□□□ 0.36
PDGFBP01127 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDGFBP01127 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
PDGFBP01127 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PDGFBP01127 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 MIR346-201ENST00000362234 95 ntBASIC17.27■□□□□ 0.36
PDGFBP01127 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.27■□□□□ 0.36
PDGFBP01127 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDGFBP01127 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDGFBP01127 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.27■□□□□ 0.36
PDGFBP01127 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
PDGFBP01127 SLC25A6P5-201ENST00000435663 894 ntBASIC17.27■□□□□ 0.36
PDGFBP01127 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.27■□□□□ 0.36
PDGFBP01127 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.27■□□□□ 0.36
PDGFBP01127 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.27■□□□□ 0.36
PDGFBP01127 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.27■□□□□ 0.36
PDGFBP01127 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFBP01127 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.27■□□□□ 0.36
PDGFBP01127 AC132938.2-201ENST00000579188 680 ntBASIC17.27■□□□□ 0.36
PDGFBP01127 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.27■□□□□ 0.36
PDGFBP01127 AL591163.1-201ENST00000641757 987 ntBASIC17.27■□□□□ 0.36
PDGFBP01127 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDGFBP01127 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDGFBP01127 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.27■□□□□ 0.36
PDGFBP01127 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.27■□□□□ 0.36
PDGFBP01127 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFBP01127 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PDGFBP01127 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFBP01127 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFBP01127 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PDGFBP01127 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PDGFBP01127 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PDGFBP01127 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PDGFBP01127 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDGFBP01127 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 DGCR5-201ENST00000399539 862 ntBASIC17.26■□□□□ 0.35
PDGFBP01127 AC112492.5-201ENST00000421897 457 ntBASIC17.26■□□□□ 0.35
PDGFBP01127 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDGFBP01127 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFBP01127 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.26■□□□□ 0.35
PDGFBP01127 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.26■□□□□ 0.35
PDGFBP01127 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.26■□□□□ 0.35
PDGFBP01127 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.26■□□□□ 0.35
PDGFBP01127 AC008267.7-201ENST00000624570 1194 ntBASIC17.26■□□□□ 0.35
PDGFBP01127 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDGFBP01127 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.26■□□□□ 0.35
PDGFBP01127 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDGFBP01127 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PDGFBP01127 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFBP01127 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDGFBP01127 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms