Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
LGI1O95970 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.05■□□□□ 0.16
LGI1O95970 AL136038.3-201ENST00000561909 1096 ntBASIC16.05■□□□□ 0.16
LGI1O95970 AC111152.3-201ENST00000569699 673 ntBASIC16.05■□□□□ 0.16
LGI1O95970 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.05■□□□□ 0.16
LGI1O95970 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.05■□□□□ 0.16
LGI1O95970 IGHV3-41-201ENST00000613121 348 ntBASIC16.05■□□□□ 0.16
LGI1O95970 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LGI1O95970 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LGI1O95970 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
LGI1O95970 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LGI1O95970 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.04■□□□□ 0.16
LGI1O95970 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LGI1O95970 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.04■□□□□ 0.16
LGI1O95970 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.04■□□□□ 0.16
LGI1O95970 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.04■□□□□ 0.16
LGI1O95970 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 FAM220CP-201ENST00000395253 831 ntBASIC16.04■□□□□ 0.16
LGI1O95970 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.04■□□□□ 0.16
LGI1O95970 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.04■□□□□ 0.16
LGI1O95970 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.04■□□□□ 0.16
LGI1O95970 FAM86EP-206ENST00000510506 987 ntBASIC16.04■□□□□ 0.16
LGI1O95970 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.04■□□□□ 0.16
LGI1O95970 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.04■□□□□ 0.16
LGI1O95970 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.04■□□□□ 0.16
LGI1O95970 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.04■□□□□ 0.16
LGI1O95970 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.04■□□□□ 0.16
LGI1O95970 AC005915.1-201ENST00000624912 2018 ntBASIC16.04■□□□□ 0.16
LGI1O95970 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LGI1O95970 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
LGI1O95970 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LGI1O95970 KRT8P10-201ENST00000450021 1447 ntBASIC16.03■□□□□ 0.16
LGI1O95970 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LGI1O95970 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 AC005332.1-201ENST00000577698 1310 ntBASIC16.03■□□□□ 0.16
LGI1O95970 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.03■□□□□ 0.16
LGI1O95970 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.03■□□□□ 0.16
LGI1O95970 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.03■□□□□ 0.16
LGI1O95970 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.03■□□□□ 0.16
LGI1O95970 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.03■□□□□ 0.16
LGI1O95970 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.03■□□□□ 0.16
LGI1O95970 KRT8P26-201ENST00000534154 1276 ntBASIC16.03■□□□□ 0.16
LGI1O95970 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.03■□□□□ 0.16
LGI1O95970 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 STK25P1-201ENST00000585406 838 ntBASIC16.03■□□□□ 0.16
LGI1O95970 AL358472.4-201ENST00000633140 710 ntBASIC16.03■□□□□ 0.16
LGI1O95970 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.03■□□□□ 0.16
LGI1O95970 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
LGI1O95970 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.03■□□□□ 0.16
LGI1O95970 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LGI1O95970 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms